RNA–Protein interactions for RNA: ENST00000379500.6

CMTM1-205, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CMTM1, Length 1,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-205ENST00000379500 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
CMTM1-205ENST00000379500 STAG1Q8WVM7 1258 aa16.68■□□□□ 0.26
CMTM1-205ENST00000379500 ZKSCAN4Q969J2 545 aaPredicted RBP16.68■□□□□ 0.26
CMTM1-205ENST00000379500 KRT23Q9C075 422 aa16.68■□□□□ 0.26
CMTM1-205ENST00000379500 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
CMTM1-205ENST00000379500 FZD1Q9UP38 647 aa16.68■□□□□ 0.26
CMTM1-205ENST00000379500 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
CMTM1-205ENST00000379500 ECE1P42892 770 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 KRT32Q14532 448 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 DEFB115Q30KQ5 88 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-205ENST00000379500 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 PAXIP1Q6ZW49 1069 aaPredicted RBP16.67■□□□□ 0.26
CMTM1-205ENST00000379500 ERO1BQ86YB8 467 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 SLC44A5Q8NCS7 719 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 ESR2Q92731 530 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
CMTM1-205ENST00000379500 AS3MTQ9HBK9 375 aa16.67■□□□□ 0.26
CMTM1-205ENST00000379500 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
CMTM1-205ENST00000379500 GDF11O95390 407 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 CYP21A2P08686 494 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 FGRP09769 529 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 TSPY3P0CV98 308 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 TSPY8P0CW00 308 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 PPATQ06203 517 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
CMTM1-205ENST00000379500 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
CMTM1-205ENST00000379500 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
CMTM1-205ENST00000379500 RASSF10A6NK89 507 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 TSPY2A6NKD2 308 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 SLC27A2O14975 620 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 PRDM1O75626 825 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 GH2P01242 217 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 RASA1P20936 1047 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 EVX2Q03828 476 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 C8orf34Q49A92 452 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 CCDC178Q5BJE1 867 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
CMTM1-205ENST00000379500 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
CMTM1-205ENST00000379500 SNCAIPQ9Y6H5 919 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
CMTM1-205ENST00000379500 SPDYE5A6NIY4 337 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
CMTM1-205ENST00000379500 PTPRAP18433 802 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 TFAP4Q01664 338 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 NCOA7Q8NI08 942 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 OPTNQ96CV9 577 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 KANSL2Q9H9L4 492 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
CMTM1-205ENST00000379500 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 AKR1B1P15121 316 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 HSPA4P34932 840 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 PPIL2Q13356 520 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
CMTM1-205ENST00000379500 E7EWF7 191 aa16.62■□□□□ 0.25
CMTM1-205ENST00000379500 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
CMTM1-205ENST00000379500 NOGQ13253 232 aa16.62■□□□□ 0.25
CMTM1-205ENST00000379500 SART3Q15020 963 aaKnown RBP16.62■□□□□ 0.25
CMTM1-205ENST00000379500 TSGA10IPQ3SY00 556 aa16.62■□□□□ 0.25
CMTM1-205ENST00000379500 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
CMTM1-205ENST00000379500 ZNF280CQ8ND82 737 aa16.62■□□□□ 0.25
CMTM1-205ENST00000379500 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
CMTM1-205ENST00000379500 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
CMTM1-205ENST00000379500 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
CMTM1-205ENST00000379500 CXCL11O14625 94 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 SLC10A3P09131 477 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 PSMA5P28066 241 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 GTF2A2P52657 109 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 ICA1Q05084 483 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 SNAPC2Q13487 334 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
CMTM1-205ENST00000379500 SEPT2Q15019 361 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 FEZ1Q99689 392 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 NEDD4P46934 1319 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
CMTM1-205ENST00000379500 ERICH2A1L162 156 aa16.6■□□□□ 0.25
CMTM1-205ENST00000379500 B4E1Z4 1266 aa16.6■□□□□ 0.25
CMTM1-205ENST00000379500 KDM4AO75164 1064 aa16.6■□□□□ 0.25
CMTM1-205ENST00000379500 USP14P54578 494 aa16.6■□□□□ 0.25
CMTM1-205ENST00000379500 INHBEP58166 350 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms