RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GJA10Q969M2 543 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 KRT23Q9C075 422 aa9.32□□□□□ -0.92
CKAP2-203ENST00000378037 EPB41L4AQ9HCS5 686 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-203ENST00000378037 RNF216Q9NWF9 866 aaPredicted RBP9.32□□□□□ -0.92
CKAP2-203ENST00000378037 GPSM2P81274 684 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 EZH2Q15910 746 aaKnown RBP9.31□□□□□ -0.92
CKAP2-203ENST00000378037 PRR5LQ6MZQ0 368 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 CEP57L1Q8IYX8 460 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 ZNF34Q8IZ26 560 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 DSCC1Q9BVC3 393 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 TANGO6Q9C0B7 1094 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 TBC1D7Q9P0N9 293 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 AOX1Q06278 1338 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 CHMP2AO43633 222 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 NDUFA8P51970 172 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 ZNF277Q9NRM2 450 aaPredicted RBP9.31□□□□□ -0.92
CKAP2-203ENST00000378037 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
CKAP2-203ENST00000378037 FZD1Q9UP38 647 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 OVOS2A0A0G2JMS6 1433 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 GSG1L2A8MUP6 293 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 H0YIN7 160 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 NRDCO43847 1150 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 AOC3Q16853 763 aa9.31□□□□□ -0.92
CKAP2-203ENST00000378037 MRPS27Q92552 414 aaKnown RBP9.31□□□□□ -0.92
CKAP2-203ENST00000378037 RBM17Q96I25 401 aaKnown RBP9.31□□□□□ -0.92
CKAP2-203ENST00000378037 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
CKAP2-203ENST00000378037 DDX39AO00148 427 aaKnown RBP9.3□□□□□ -0.92
CKAP2-203ENST00000378037 PPARDQ03181 441 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 ST3GAL1Q11201 340 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 SKIDA1Q1XH10 827 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 LONRF3Q496Y0 759 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 NOM1Q5C9Z4 860 aaKnown RBP9.3□□□□□ -0.92
CKAP2-203ENST00000378037 LRP10Q7Z4F1 713 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 OGFOD1Q8N543 542 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 ZNF526Q8TF50 670 aaPredicted RBP9.3□□□□□ -0.92
CKAP2-203ENST00000378037 ABCC12Q96J65 1359 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 ARID5BQ14865 1188 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 CCDC178Q5BJE1 867 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 JMYQ8N9B5 988 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 FANCBQ8NB91 859 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 COA7Q96BR5 231 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 TMOD2Q9NZR1 351 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 PCDHA7Q9UN72 937 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 CENPFP49454 3210 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 CCDC196A0A1B0GTZ2 297 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 NAP1L1P55209 391 aaKnown RBP9.3□□□□□ -0.92
CKAP2-203ENST00000378037 INF2Q27J81 1249 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 EYA3Q99504 573 aa9.3□□□□□ -0.92
CKAP2-203ENST00000378037 TDRD3Q9H7E2 651 aaKnown RBP9.3□□□□□ -0.92
CKAP2-203ENST00000378037 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.3□□□□□ -0.92
CKAP2-203ENST00000378037 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 ERVV-1B6SEH8 477 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 FOXN1O15353 648 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CIAO1O76071 339 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
CKAP2-203ENST00000378037 TXKP42681 527 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 PLCD1P51178 756 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CACNB1Q02641 598 aaPredicted RBP9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CUL4AQ13619 759 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 MYSM1Q5VVJ2 828 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CCDC43Q96MW1 224 aaKnown RBP9.29□□□□□ -0.92
CKAP2-203ENST00000378037 ANKRD2Q9GZV1 360 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 UBA7P41226 1012 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 ANTXR2P58335 489 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 ANO1Q5XXA6 986 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 STAG2Q8N3U4 1231 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 STK32BQ9NY57 414 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 LDHCP07864 332 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CALM1P0DP23 149 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CALM2P0DP24 149 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CALM3P0DP25 149 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 VEGFAP15692 232 aaPredicted RBP9.29□□□□□ -0.92
CKAP2-203ENST00000378037 MKRN3Q13064 507 aaKnown RBP9.29□□□□□ -0.92
CKAP2-203ENST00000378037 CCDC174Q6PII3 467 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 SLC30A10Q6XR72 485 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 USP49Q70CQ1 688 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 DYMQ7RTS9 669 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 PCDHB6Q9Y5E3 794 aa9.29□□□□□ -0.92
CKAP2-203ENST00000378037 RGPD2P0DJD1 1756 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 PPEF1O14829 653 aaPredicted RBP9.28□□□□□ -0.92
CKAP2-203ENST00000378037 CCDC34Q96HJ3 373 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 CBX8Q9HC52 389 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 IFNKQ9P0W0 207 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 NOL7Q9UMY1 257 aaKnown RBP9.28□□□□□ -0.92
CKAP2-203ENST00000378037 CARMIL3Q8ND23 1372 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 PFKFB2O60825 505 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 CSF1RP07333 972 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 GRIN1Q05586 938 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 ZSCAN30Q86W11 494 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 ZSCAN10Q96SZ4 725 aaPredicted RBP9.28□□□□□ -0.92
CKAP2-203ENST00000378037 HINFPQ9BQA5 517 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 CCDC39Q9UFE4 941 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 SAMM50Q9Y512 469 aa9.28□□□□□ -0.92
CKAP2-203ENST00000378037 A0A0U1RQG5 324 aaPredicted RBP9.27□□□□□ -0.92
CKAP2-203ENST00000378037 TRIM75PA6NK02 468 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms