RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	PODN	Q7Z5L7	613 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	TEKT1	Q969V4	418 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	LLPH	Q9BRT6	129 aa	Known RBP	13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	TSPY3	P0CV98	308 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	TSPY8	P0CW00	308 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	CATIP	Q7Z7H3	387 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	SALL1	Q9NSC2	1324 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	RAD17	O75943	681 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	TFAP4	Q01664	338 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	TCP10	Q12799	353 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	RTN1	Q16799	776 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	CCDC93	Q567U6	631 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	SUPT20H	Q8NEM7	779 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	BCS1L	Q9Y276	419 aa		13.53	□□□□□ -0.24
LMO7-204	ENST00000377499	KRT85	P78386	507 aa		13.52	□□□□□ -0.24
LMO7-204	ENST00000377499	USP48	Q86UV5	1035 aa		13.52	□□□□□ -0.24
LMO7-204	ENST00000377499	TRIM22	Q8IYM9	498 aa		13.52	□□□□□ -0.24
LMO7-204	ENST00000377499	TMTC2	Q8N394	836 aa		13.52	□□□□□ -0.24
LMO7-204	ENST00000377499	SLC44A5	Q8NCS7	719 aa		13.52	□□□□□ -0.24
LMO7-204	ENST00000377499	LY9	Q9HBG7	655 aa		13.52	□□□□□ -0.24
LMO7-204	ENST00000377499	IRS2	Q9Y4H2	1338 aa		13.52	□□□□□ -0.24
LMO7-204	ENST00000377499	CCDC66	A2RUB6	948 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	NMT2	O60551	498 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	ATP2B2	Q01814	1243 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	GIMAP6	Q6P9H5	292 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	CCDC125	Q86Z20	511 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	IGDCC4	Q8TDY8	1250 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	DAGLA	Q9Y4D2	1042 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	TACC3	Q9Y6A5	838 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	CACNB3	P54284	484 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	CSPP1	Q1MSJ5	1256 aa		13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.52	□□□□□ -0.25
LMO7-204	ENST00000377499	USP17L3	A6NCW0	530 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	USP17L4	A6NCW7	530 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	SSRP1	Q08945	709 aa	Known RBP	13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	USP17L1	Q7RTZ2	530 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	ZNF287	Q9HBT7	754 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	PIM2	Q9P1W9	311 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	ZMYM6	O95789	1325 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	CTDNEP1	O95476	244 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	ZNF654	Q8IZM8	581 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	CERS5	Q8N5B7	392 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	ALG1	Q9BT22	464 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	AGXT2	Q9BYV1	514 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	LMBRD1	Q9NUN5	540 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	ARAP2	Q8WZ64	1704 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	MPHOSPH10	O00566	681 aa	Known RBP	13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	PLCD1	P51178	756 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	CC2D2B	Q6DHV5	1058 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	ILDR1	Q86SU0	546 aa	Predicted RBP	13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	GJB4	Q9NTQ9	266 aa		13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	RBM27	Q9P2N5	1060 aa	Known RBP	13.51	□□□□□ -0.25
LMO7-204	ENST00000377499	CCDC196	A0A1B0GTZ2	297 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	CAPN2	P17655	700 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	KAT14	Q9H8E8	782 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	GPR75-ASB3	A0A0A6YYF3	556 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	hCG_1642624	A0A1W2PR95	340 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	CDC27	P30260	824 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	ZNF710	Q8N1W2	664 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	CTCFL	Q8NI51	663 aa	Predicted RBP	13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	SPATA32	Q96LK8	384 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	FAM205A	Q6ZU69	1335 aa		13.5	□□□□□ -0.25
LMO7-204	ENST00000377499	LIFR	P42702	1097 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	SF3A1	Q15459	793 aa	Known RBP	13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	RTKN2	Q8IZC4	609 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	AIFM3	Q96NN9	605 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	HPS5	Q9UPZ3	1129 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	MYH13	Q9UKX3	1938 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	WDR19	Q8NEZ3	1342 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	CRK	P46108	304 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	DALRD3	Q5D0E6	543 aa	Known RBP	13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	C12orf60	Q5U649	245 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	ENAH	Q8N8S7	591 aa	Predicted RBP	13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	GADD45B	O75293	160 aa	Predicted RBP	13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	PPP4C	P60510	307 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	OGFOD1	Q8N543	542 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	MTFR1L	Q9H019	292 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	ANAPC4	Q9UJX5	808 aa		13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	TNS1	Q9HBL0	1735 aa	Known RBP	13.49	□□□□□ -0.25
LMO7-204	ENST00000377499	ATP2B1	P20020	1258 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	GTF2A1	P52655	376 aa	Predicted RBP	13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	BICD2	Q8TD16	824 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	JDP2	Q8WYK2	163 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	CASZ1	Q86V15	1759 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	EIF6	P56537	245 aa	Known RBP	13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	TTC6	Q86TZ1	520 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	NIM1K	Q8IY84	436 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	FANCB	Q8NB91	859 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	SMARCC2	Q8TAQ2	1214 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	FLT1	P17948	1338 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	HLA-DOA	P06340	250 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	SAFB	Q15424	915 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	STRIP1	Q5VSL9	837 aa		13.48	□□□□□ -0.25
LMO7-204	ENST00000377499	MBD3	O95983	291 aa		13.47	□□□□□ -0.25
LMO7-204	ENST00000377499	KIAA2012	Q0VF49	1180 aa		13.47	□□□□□ -0.25
LMO7-204	ENST00000377499	KLHL40	Q2TBA0	621 aa		13.47	□□□□□ -0.25
LMO7-204	ENST00000377499	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms