RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TXKP42681 527 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 NASPP49321 788 aaPredicted RBP9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 KIF22Q14807 665 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 KRT79Q5XKE5 535 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 FILIP1Q7Z7B0 1213 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 MMRN2Q9H8L6 949 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 DACH1Q9UI36 760 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 VWA3AA6NCI4 1184 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 HSPA4P34932 840 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 GMPSP49915 693 aaPredicted RBP9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 SPP2Q13103 211 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 MTX1Q13505 466 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 ADCK5Q3MIX3 580 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 MAEAQ7L5Y9 396 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 ATG9AQ7Z3C6 839 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 DPP9Q86TI2 863 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 ZNF341Q9BYN7 854 aa9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 ZSCAN16Q9H4T2 348 aaPredicted RBP9.66□□□□□ -0.86
CRNKL1-202ENST00000377340 KDM6AO15550 1401 aaPredicted RBP9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 PSMD14O00487 310 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 DEXIO95424 95 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 KLRK1P26718 216 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 RASSF7Q02833 373 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 EEPD1Q7L9B9 569 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 GPKOWQ92917 476 aaPredicted RBP eCLIP9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 DHX58Q96C10 678 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 DHX36Q9H2U1 1008 aaKnown RBP9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 ATP10DQ9P241 1426 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 SYT1P21579 422 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 STAT6P42226 847 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 UBXN2AP68543 259 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 PABPC4Q13310 644 aaKnown RBP eCLIP9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 RASA3Q14644 834 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 USP17L2Q6R6M4 530 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 FANCBQ8NB91 859 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 KANSL2Q9H9L4 492 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 CAMTA1Q9Y6Y1 1673 aa9.65□□□□□ -0.86
CRNKL1-202ENST00000377340 BCL9O00512 1426 aa9.65□□□□□ -0.87
CRNKL1-202ENST00000377340 LETM1O95202 739 aaPredicted RBP9.65□□□□□ -0.87
CRNKL1-202ENST00000377340 SRGNP10124 158 aa9.65□□□□□ -0.87
CRNKL1-202ENST00000377340 SYKP43405 635 aa9.65□□□□□ -0.87
CRNKL1-202ENST00000377340 BRDTQ58F21 947 aaPredicted RBP9.65□□□□□ -0.87
CRNKL1-202ENST00000377340 CHGBP05060 677 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 TOP1P11387 765 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 DDR1Q08345 913 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 NOM1Q5C9Z4 860 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 ANGEL2Q5VTE6 544 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 TTC16Q8NEE8 873 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 STRBPQ96SI9 672 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 ARID3AQ99856 593 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 CCPG1Q9ULG6 757 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 PCDHA1Q9Y5I3 950 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 SMCO2A6NFE2 343 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 CCNT1O60563 726 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 CDK8P49336 464 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 SNAP25P60880 206 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 AMPD3Q01432 767 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 C3orf67Q6ZVT6 689 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 SPTLC2O15270 562 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 ADCY7P51828 1080 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 FOXP4Q8IVH2 680 aaPredicted RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 GGA3Q9NZ52 723 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 CSF1RP07333 972 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 ASIC1P78348 528 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 RABL6Q3YEC7 729 aaPredicted RBP9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 DEF6Q9H4E7 631 aa9.64□□□□□ -0.87
CRNKL1-202ENST00000377340 MYO3BQ8WXR4 1341 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 SIGLEC1Q9BZZ2 1709 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 ASNSP08243 561 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 TXNRD3Q86VQ6 643 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 FBXO11Q86XK2 927 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 REXO1Q8N1G1 1221 aaKnown RBP9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 PI4K2BQ8TCG2 481 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 CPVLQ9H3G5 476 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 ZSWIM5Q9P217 1185 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 DDNO94850 711 aaPredicted RBP9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 TTLL1O95922 423 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 LMNB1P20700 586 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 USP8P40818 1118 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 RAD51AP2Q09MP3 1159 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 KCTD2Q14681 263 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 SEPT2Q15019 361 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 PPFIBP1Q86W92 1011 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 GLG1Q92896 1179 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 MAP4K1Q92918 833 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 TNS2Q63HR2 1409 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 GRIPAP1Q4V328 841 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 STRIP1Q5VSL9 837 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 KRT40Q6A162 431 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 STYK1Q6J9G0 422 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 PSTPIP2Q9H939 334 aa9.63□□□□□ -0.87
CRNKL1-202ENST00000377340 POLLQ9UGP5 575 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms