RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 HERVK_113P62684 666 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 MTMR2Q13614 643 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 GRIN2CQ14957 1233 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 GPR142Q7Z601 462 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 SOCS4Q8WXH5 440 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 PRDM5Q9NQX1 630 aaPredicted RBP13.56□□□□□ -0.24
DDX39B-201ENST00000376177 TCF20Q9UGU0 1960 aaKnown RBP13.56□□□□□ -0.24
DDX39B-201ENST00000376177 BDP1A6H8Y1 2624 aa13.56□□□□□ -0.24
DDX39B-201ENST00000376177 EYA2O00167 538 aa13.55□□□□□ -0.24
DDX39B-201ENST00000376177 CAP2P40123 477 aa13.55□□□□□ -0.24
DDX39B-201ENST00000376177 EPHB4P54760 987 aa13.55□□□□□ -0.24
DDX39B-201ENST00000376177 IRX3P78415 501 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-201ENST00000376177 SMAD3P84022 425 aaKnown RBP13.55□□□□□ -0.24
DDX39B-201ENST00000376177 PABPC4Q13310 644 aaKnown RBP eCLIP13.55□□□□□ -0.244e-35■■■□□ 18.4
DDX39B-201ENST00000376177 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
DDX39B-201ENST00000376177 GPRC5AQ8NFJ5 357 aa13.55□□□□□ -0.24
DDX39B-201ENST00000376177 OSBPL5Q9H0X9 879 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-201ENST00000376177 PLXNA1Q9UIW2 1896 aa13.55□□□□□ -0.24
DDX39B-201ENST00000376177 CHD7Q9P2D1 2997 aa13.55□□□□□ -0.24
DDX39B-201ENST00000376177 TRIM43BA6NCK2 446 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 USP17L5A8MUK1 530 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 TBC1D12O60347 775 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 ITGB8P26012 769 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 RGS2P41220 211 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
DDX39B-201ENST00000376177 ERVK-9P63128 1117 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 ERVK-24P63145 666 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
DDX39B-201ENST00000376177 ANO1Q5XXA6 986 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 TRIM43Q96BQ3 446 aaPredicted RBP13.54□□□□□ -0.24
DDX39B-201ENST00000376177 APBA2Q99767 749 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 SIL1Q9H173 461 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 CNGA1P29973 690 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 TRIM60Q495X7 471 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 DZIP1Q86YF9 867 aaKnown RBP13.54□□□□□ -0.24
DDX39B-201ENST00000376177 ABCF2Q9UG63 623 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 PRKAG2Q9UGJ0 569 aa13.54□□□□□ -0.24
DDX39B-201ENST00000376177 DDX20Q9UHI6 824 aaKnown RBP13.54□□□□□ -0.24
DDX39B-201ENST00000376177 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 MAPK4P31152 587 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 RASGRF1Q13972 1273 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
DDX39B-201ENST00000376177 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 PPM1EQ8WY54 764 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 FAM122AQ96E09 287 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 PDLIM7Q9NR12 457 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 DENND2AQ9ULE3 1009 aa13.53□□□□□ -0.24
DDX39B-201ENST00000376177 GBF1Q92538 1859 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 MYO5AQ9Y4I1 1855 aaKnown RBP13.52□□□□□ -0.25
DDX39B-201ENST00000376177 CNMDO75829 334 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 HOXA7P31268 230 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-201ENST00000376177 CYP2C19P33261 490 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 BACE1P56817 501 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 SLC39A5Q6ZMH5 540 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 LPAR1Q92633 364 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-201ENST00000376177 USP44Q9H0E7 712 aa13.52□□□□□ -0.25
DDX39B-201ENST00000376177 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-201ENST00000376177 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
DDX39B-201ENST00000376177 DNM1LO00429 736 aa13.51□□□□□ -0.25
DDX39B-201ENST00000376177 MECOMQ03112 1051 aa13.51□□□□□ -0.25
DDX39B-201ENST00000376177 CCDC102BQ68D86 513 aa13.51□□□□□ -0.25
DDX39B-201ENST00000376177 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
DDX39B-201ENST00000376177 WDR18Q9BV38 432 aa13.51□□□□□ -0.25
DDX39B-201ENST00000376177 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
DDX39B-201ENST00000376177 SMCHD1A6NHR9 2005 aa13.5□□□□□ -0.25
DDX39B-201ENST00000376177 GDF11O95390 407 aa13.5□□□□□ -0.25
DDX39B-201ENST00000376177 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
DDX39B-201ENST00000376177 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
DDX39B-201ENST00000376177 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
DDX39B-201ENST00000376177 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-201ENST00000376177 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 CCAR1Q8IX12 1150 aaKnown RBP13.49□□□□□ -0.25
DDX39B-201ENST00000376177 ADAMTS19Q8TE59 1207 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 FERMT2Q96AC1 680 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 RNPC3Q96LT9 517 aaKnown RBP13.49□□□□□ -0.25
DDX39B-201ENST00000376177 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-201ENST00000376177 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 EMILIN3Q9NT22 766 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 TMOD4Q9NZQ9 345 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 PA2G4Q9UQ80 394 aaKnown RBP13.49□□□□□ -0.25
DDX39B-201ENST00000376177 SEMA3EO15041 775 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 DNAJB2P25686 324 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
DDX39B-201ENST00000376177 WDR78Q5VTH9 848 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 MFSD14CQ5VZR4 134 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 TBC1D9Q6ZT07 1266 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
DDX39B-201ENST00000376177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-201ENST00000376177 MYO9BQ13459 2157 aa13.48□□□□□ -0.25
DDX39B-201ENST00000376177 IGHA2P01877 340 aa13.48□□□□□ -0.25
DDX39B-201ENST00000376177 CYBAP13498 195 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms