RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 LY9Q9HBG7 655 aa12.31□□□□□ -0.44
PDPN-203ENST00000376061 ANGEL1Q9UNK9 670 aaKnown RBP12.31□□□□□ -0.44
PDPN-203ENST00000376061 DDTLA6NHG4 134 aaPredicted RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 TCP10L2B9ZVM9 353 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 IFIT3O14879 490 aaKnown RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 MYO1BO43795 1136 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 GRIN3BO60391 1043 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 RASA1P20936 1047 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 CDK8P49336 464 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 NT5C2P49902 561 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 EVCP57679 992 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 KIF4BQ2VIQ3 1234 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 SAMD7Q7Z3H4 446 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 UBAC1Q9BSL1 405 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 MTA3Q9BTC8 594 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 DHX36Q9H2U1 1008 aaKnown RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 VEZTQ9HBM0 779 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 SENP2Q9HC62 589 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 ZC3H4Q9UPT8 1303 aaKnown RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 H7C1D1 291 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 ASTN2O75129 1339 aaPredicted RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 TNKSO95271 1327 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 DDIT3P35638 169 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 SART3Q15020 963 aaKnown RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 SEC23AQ15436 765 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 FAM47AQ5JRC9 791 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 CCDC83Q8IWF9 413 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 ZSCAN29Q8IWY8 852 aaPredicted RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 NECAB1Q8N987 351 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 TRPM4Q8TD43 1214 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 SLKQ9H2G2 1235 aaPredicted RBP12.3□□□□□ -0.44
PDPN-203ENST00000376061 DNAJC18Q9H819 358 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 MKNK2Q9HBH9 465 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 ZNF287Q9HBT7 754 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 BRPF3Q9ULD4 1205 aa12.3□□□□□ -0.44
PDPN-203ENST00000376061 SCN4AP35499 1836 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 TSPY2A6NKD2 308 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 GOLGA8BA8MQT2 603 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 PFKFB2O60825 505 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 SHMT1P34896 483 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 LIFRP42702 1097 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 STK3Q13188 491 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 WTAPQ15007 396 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 FAM83AQ86UY5 434 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 SGMS1Q86VZ5 419 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 IQCA1Q86XH1 822 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 ENAHQ8N8S7 591 aaPredicted RBP12.29□□□□□ -0.44
PDPN-203ENST00000376061 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 GTF3C6Q969F1 213 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
PDPN-203ENST00000376061 INTS4Q96HW7 963 aaKnown RBP12.29□□□□□ -0.44
PDPN-203ENST00000376061 ZSCAN10Q96SZ4 725 aaPredicted RBP12.29□□□□□ -0.44
PDPN-203ENST00000376061 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
PDPN-203ENST00000376061 MYH4Q9Y623 1939 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 NID2Q14112 1375 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 ERICH2A1L162 156 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 NMT2O60551 498 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 SLURP2P0DP57 97 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
PDPN-203ENST00000376061 EPS15P42566 896 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 TFAP4Q01664 338 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 APOA5Q6Q788 366 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
PDPN-203ENST00000376061 CSRNP1Q96S65 589 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 PI4KBQ9UBF8 816 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 NAP1L2Q9ULW6 460 aaPredicted RBP12.28□□□□□ -0.44
PDPN-203ENST00000376061 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
PDPN-203ENST00000376061 FAM196BA6NMK8 535 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 TSPY3P0CV98 308 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 TSPY8P0CW00 308 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 SCRN1Q12765 414 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 NFXL1Q6ZNB6 911 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 ZNF444Q8N0Y2 327 aaPredicted RBP12.27□□□□□ -0.45
PDPN-203ENST00000376061 CRACR2BQ8N4Y2 399 aaPredicted RBP12.27□□□□□ -0.45
PDPN-203ENST00000376061 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
PDPN-203ENST00000376061 TMEM39BQ9GZU3 492 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 PGAP2Q9UHJ9 254 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
PDPN-203ENST00000376061 POLR2AP24928 1970 aaKnown RBP12.27□□□□□ -0.45
PDPN-203ENST00000376061 POTEMA6NI47 508 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 CCDC69A6NI79 296 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 AKR1B1P15121 316 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms