RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KLRK1P26718 216 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 ARID4AP29374 1257 aaPredicted RBP14.77□□□□□ -0.05
MSH5-204ENST00000375755 ADD2P35612 726 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 TXLNAP40222 546 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 ICE2Q659A1 982 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 FAM196AQ6ZSG2 479 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 TRPC5Q9UL62 973 aaPredicted RBP14.77□□□□□ -0.05
MSH5-204ENST00000375755 CARMIL3Q8ND23 1372 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 CCDC151A5D8V7 595 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 GYG1P46976 350 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 GTF2A1P52655 376 aaPredicted RBP14.77□□□□□ -0.05
MSH5-204ENST00000375755 TOGARAM2Q6ZUX3 1019 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 SPATA5Q8NB90 893 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 ZSWIM4Q9H7M6 989 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 INCENPQ9NQS7 918 aa14.77□□□□□ -0.05
MSH5-204ENST00000375755 SPTLC2O15270 562 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 CBFA2T2O43439 604 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 ZPR1O75312 459 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 CTR9Q6PD62 1173 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 RGS22Q8NE09 1264 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 APPBP2Q92624 585 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 YY1AP1Q9H869 796 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
MSH5-204ENST00000375755 SCN7AQ01118 1682 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 ZNF831Q5JPB2 1677 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 SLC5A1P13866 664 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 PFKFB1P16118 471 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 MCM6Q14566 821 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 LEKR1Q6ZMV7 388 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 KCNG4Q8TDN1 519 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 INTS13Q9NVM9 706 aa14.76□□□□□ -0.05
MSH5-204ENST00000375755 N4BP1O75113 896 aaKnown RBP14.75□□□□□ -0.05
MSH5-204ENST00000375755 PDE6AP16499 860 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 PDIA3P30101 505 aaKnown RBP14.75□□□□□ -0.05
MSH5-204ENST00000375755 EXOSC10Q01780 885 aaKnown RBP14.75□□□□□ -0.05
MSH5-204ENST00000375755 BRD3Q15059 726 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 PACS2Q86VP3 889 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 NBPF5PQ86XG9 351 aaPredicted RBP14.75□□□□□ -0.05
MSH5-204ENST00000375755 RAB11FIP4Q86YS3 637 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 SETDB2Q96T68 719 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 ARAP2Q8WZ64 1704 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 TCRBV5S4A2TA0A5A2 114 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 MYL5Q02045 173 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 JAKMIP3Q5VZ66 844 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 BAG1Q99933 345 aaPredicted RBP14.75□□□□□ -0.05
MSH5-204ENST00000375755 AGXT2Q9BYV1 514 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 MROH7-TTC4A0A0A0MT08 1334 aa14.75□□□□□ -0.05
MSH5-204ENST00000375755 YEATS4O95619 227 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 IVLP07476 585 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 AXDND1Q5T1B0 1012 aaPredicted RBP14.74□□□□□ -0.05
MSH5-204ENST00000375755 MAGEB6Q8N7X4 407 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 NBPF3Q9H094 633 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 LY75O60449 1722 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 HMGB1P09429 215 aaKnown RBP14.74□□□□□ -0.05
MSH5-204ENST00000375755 KARSQ15046 597 aaKnown RBP14.74□□□□□ -0.05
MSH5-204ENST00000375755 BEND6Q5SZJ8 279 aaPredicted RBP14.74□□□□□ -0.05
MSH5-204ENST00000375755 POLR3EQ9NVU0 708 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 RC3H1Q5TC82 1133 aaKnown RBP14.74□□□□□ -0.05
MSH5-204ENST00000375755 ANKRD18AQ8IVF6 992 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 GOLGA6L1Q8N7Z2 621 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 ZNF512BQ96KM6 892 aaPredicted RBP14.74□□□□□ -0.05
MSH5-204ENST00000375755 DESI2Q9BSY9 194 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 ANKZF1Q9H8Y5 726 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 FANCLQ9NW38 375 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 MINPP1Q9UNW1 487 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 C4AP0C0L4 1744 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 C4BP0C0L5 1744 aa14.74□□□□□ -0.05
MSH5-204ENST00000375755 GOLGA6L9A6NEM1 432 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 TRIM37O94972 964 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 MAGEA9P43362 315 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 STK11IPQ8N1F8 1099 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 CCDC12Q8WUD4 166 aaPredicted RBP14.73□□□□□ -0.05
MSH5-204ENST00000375755 IRX2Q9BZI1 471 aaPredicted RBP14.73□□□□□ -0.05
MSH5-204ENST00000375755 SUGCTQ9HAC7 445 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 TUBE1Q9UJT0 475 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 FAN1Q9Y2M0 1017 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 A0A1B0GUL6 1792 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 APPP05067 770 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 ZFYP08048 801 aaPredicted RBP14.73□□□□□ -0.05
MSH5-204ENST00000375755 TBX2Q13207 712 aaPredicted RBP14.73□□□□□ -0.05
MSH5-204ENST00000375755 MYSM1Q5VVJ2 828 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 PDILTQ8N807 584 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 GJB4Q9NTQ9 266 aa14.73□□□□□ -0.05
MSH5-204ENST00000375755 EIF3CLB5ME19 914 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 PRKAB2O43741 272 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 WDHD1O75717 1129 aaPredicted RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 CMA1P23946 247 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 ADKP55263 362 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 CHMP4BP1P59074 171 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 SF3B3Q15393 1217 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 TTC31Q49AM3 519 aaPredicted RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 HSP90AA4PQ58FG1 418 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 PNKPQ96T60 521 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 EIF3CQ99613 913 aaKnown RBP14.72□□□□□ -0.05
MSH5-204ENST00000375755 ARMT1Q9H993 441 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 TOMM22Q9NS69 142 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 JAG2Q9Y219 1238 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 RPS6KA5O75582 802 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 RFC4P35249 363 aa14.72□□□□□ -0.05
MSH5-204ENST00000375755 NOM1Q5C9Z4 860 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms