RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 CCDC162PA2VCL2 907 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 CHMP1AQ9HD42 196 aaPredicted RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 POTEFA5A3E0 1075 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 GOLGA8SH3BPF8 625 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 CCT6AP40227 531 aaKnown RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 DEFA1P59665 94 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 DEFA3P59666 94 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 TAF8Q7Z7C8 310 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 RAB34Q9BZG1 259 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 RPH3AQ9Y2J0 694 aaPredicted RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 ARHGAP10A1A4S6 786 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 DCAF8L1A6NGE4 600 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 GNG11P61952 73 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 ESCO1Q5FWF5 840 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 SLC10A5Q5PT55 438 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 SAP30BPQ9UHR5 308 aaKnown RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 ANKRD30AQ9BXX3 1397 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 ZNF318Q5VUA4 2279 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 WDR47O94967 919 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 MMEP08473 750 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 JADE1Q6IE81 842 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 MDM1Q8TC05 714 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 UBLCP1Q8WVY7 318 aaPredicted RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 TMEM245Q9H330 911 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 FAM95CA0A1B0GW59 222 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 B4DLN1 442 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 GOLGA8TH3BQL2 631 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 TEX28O15482 410 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 SYNCRIPO60506 623 aaKnown RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 CLASP2O75122 1294 aaKnown RBP6.58□□□□□ -1.36
SCN2A-202ENST00000375427 EP400NLQ6ZTU2 488 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 TXNDC2Q86VQ3 553 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 TRIM42Q8IWZ5 723 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 CNBD2Q96M20 576 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 FANCEQ9HB96 536 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 DKK3Q9UBP4 350 aa6.58□□□□□ -1.36
SCN2A-202ENST00000375427 ARHGDIAP52565 204 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 AP1S1P61966 158 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 NXNQ6DKJ4 435 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 GNGT2O14610 69 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 KRT15P19012 456 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 PDE6CP51160 858 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 SPATA18Q8TC71 538 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 ZNF496Q96IT1 587 aaPredicted RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 APPL1Q9UKG1 709 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 TPD52L2O43399 206 aaKnown RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 HSPA9P38646 679 aaKnown RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 STAT2P52630 851 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 PSMD2Q13200 908 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 UNKQ9C0B0 810 aaKnown RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 GOLGA8CPA6NN73 597 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 MYO1BO43795 1136 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 ARF4P18085 180 aaPredicted RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 HPDP32754 393 aaPredicted RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 TBC1D1Q86TI0 1168 aaPredicted RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 ENOX1Q8TC92 643 aaKnown RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 BHMTQ93088 406 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 LARP6Q9BRS8 491 aaKnown RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 SNTNA6NMZ2 147 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 ATP13A5Q4VNC0 1218 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 SLC4A7Q9Y6M7 1214 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 CAPN7Q9Y6W3 813 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 CCNCP24863 283 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 COPB2P35606 906 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 DMPKQ09013 629 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 MYLK2Q9H1R3 596 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 TBC1D23Q9NUY8 699 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 PPP1R14DQ9NXH3 145 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 PGM3O95394 542 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 SERPINB1P30740 379 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 ALDH18A1P54886 795 aaKnown RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 KLHL24Q6TFL4 600 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 MSL3Q8N5Y2 521 aaKnown RBP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 WASF1Q92558 559 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 CCT7Q99832 543 aa6.57□□□□□ -1.36
SCN2A-202ENST00000375427 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.57□□□□□ -1.36
SCN2A-202ENST00000375427 ACTN4O43707 911 aaKnown RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 CCDC26Q8TAB7 109 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 NARS2Q96I59 477 aaKnown RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 TMC5Q6UXY8 1006 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 TMTC2Q8N394 836 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 PARVGQ9HBI0 331 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 KLHL14Q9P2G3 628 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 ATP6V1HQ9UI12 483 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 CCPG1Q9ULG6 757 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 KRT2P35908 639 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 GARSP41250 739 aaKnown RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 ITGB3BPQ13352 177 aaPredicted RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 SDE2Q6IQ49 451 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 CCDC117Q8IWD4 279 aaPredicted RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 STAMQ92783 540 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 CATSPER2Q96P56 530 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 TRMT1Q9NXH9 659 aaKnown RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 COPG2Q9UBF2 871 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 WASHC2CQ9Y4E1 1318 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 MAP3K7O43318 606 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 CYLC1P35663 651 aaPredicted RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 POLGP54098 1239 aaPredicted RBP6.56□□□□□ -1.36
SCN2A-202ENST00000375427 CCDC80Q76M96 950 aa6.56□□□□□ -1.36
SCN2A-202ENST00000375427 CATSPER1Q8NEC5 780 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms