RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 DPCR1Q3MIW9 517 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 SLC44A5Q8NCS7 719 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 TGFBRAP1Q8WUH2 860 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 SEMA3EO15041 775 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 SLC3A2P08195 630 aaKnown RBP21.07■□□□□ 0.96
RXRB-202ENST00000374685 SYKP43405 635 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 NBPF11Q86T75 865 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 MAPKAPK5Q8IW41 473 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 WASF1Q92558 559 aa21.07■□□□□ 0.96
RXRB-202ENST00000374685 RIMBP2O15034 1052 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 DEXIO95424 95 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 ST5P78524 1137 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 SHC4Q6S5L8 630 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 CCDC186Q7Z3E2 898 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 PDILTQ8N807 584 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 CERKQ8TCT0 537 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 CASZ1Q86V15 1759 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 A0A1W2PQ27 194 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 A0A1W2PQ64 194 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 A0A1W2PQD8 194 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 OLFM4Q6UX06 510 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 ANO10Q9NW15 660 aa21.06■□□□□ 0.96
RXRB-202ENST00000374685 TNRC6CQ9HCJ0 1690 aaKnown RBP21.06■□□□□ 0.96
RXRB-202ENST00000374685 XDHP47989 1333 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 LRMPQ12912 555 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 ANAPC4Q9UJX5 808 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 PCDHB6Q9Y5E3 794 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 F8W031 263 aaPredicted RBP21.05■□□□□ 0.96
RXRB-202ENST00000374685 U2AF2P26368 475 aaKnown RBP eCLIP21.05■□□□□ 0.967e-7■■■■□ 21.4
RXRB-202ENST00000374685 ZNF804AQ7Z570 1209 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 MYRIPQ8NFW9 859 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 MAP3K14Q99558 947 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 KCNF1Q9H3M0 494 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 KIAA1468Q9P260 1216 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 PYCARDQ9ULZ3 195 aa21.05■□□□□ 0.96
RXRB-202ENST00000374685 TOB1P50616 345 aaPredicted RBP21.04■□□□□ 0.96
RXRB-202ENST00000374685 ZNF75DP51815 510 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 IQCB1Q15051 598 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 PTPAQ15257 358 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 NOM1Q5C9Z4 860 aaKnown RBP21.04■□□□□ 0.96
RXRB-202ENST00000374685 CEP57L1Q8IYX8 460 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
RXRB-202ENST00000374685 CMA1P23946 247 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 PNOCQ13519 176 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 JMYQ8N9B5 988 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 SHISA4Q96DD7 197 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 MKNK2Q9HBH9 465 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 CLIP2Q9UDT6 1046 aa21.04■□□□□ 0.96
RXRB-202ENST00000374685 VEGFAP15692 232 aaPredicted RBP21.03■□□□□ 0.96
RXRB-202ENST00000374685 TFAP4Q01664 338 aa21.03■□□□□ 0.96
RXRB-202ENST00000374685 DDR1Q08345 913 aa21.03■□□□□ 0.96
RXRB-202ENST00000374685 KRT27Q7Z3Y8 459 aa21.03■□□□□ 0.96
RXRB-202ENST00000374685 STK36Q9NRP7 1315 aa21.03■□□□□ 0.96
RXRB-202ENST00000374685 PDE4BQ07343 736 aa21.03■□□□□ 0.96
RXRB-202ENST00000374685 SPTY2D1Q68D10 685 aaPredicted RBP21.03■□□□□ 0.96
RXRB-202ENST00000374685 USP17L3A6NCW0 530 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 USP17L4A6NCW7 530 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 GOLGA6L6A8MZA4 724 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 EARS2Q5JPH6 523 aaKnown RBP21.02■□□□□ 0.96
RXRB-202ENST00000374685 USP17L1Q7RTZ2 530 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 FILIP1Q7Z7B0 1213 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 CTCFLQ8NI51 663 aaPredicted RBP21.02■□□□□ 0.96
RXRB-202ENST00000374685 NOL10Q9BSC4 688 aaKnown RBP21.02■□□□□ 0.96
RXRB-202ENST00000374685 ATP8A2Q9NTI2 1148 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 GGA1Q9UJY5 639 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 NHSQ6T4R5 1651 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 FOXN1O15353 648 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 TROAPQ12815 778 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 WDR66Q8TBY9 1149 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 LEMD3Q9Y2U8 911 aa21.02■□□□□ 0.96
RXRB-202ENST00000374685 DHX40Q8IX18 779 aaKnown RBP21.01■□□□□ 0.95
RXRB-202ENST00000374685 STX8Q9UNK0 236 aa21.01■□□□□ 0.95
RXRB-202ENST00000374685 LONRF3Q496Y0 759 aa21.01■□□□□ 0.95
RXRB-202ENST00000374685 HSP90AA4PQ58FG1 418 aa21.01■□□□□ 0.95
RXRB-202ENST00000374685 THSD7AQ9UPZ6 1657 aa21.01■□□□□ 0.95
RXRB-202ENST00000374685 PLCD1P51178 756 aa21■□□□□ 0.95
RXRB-202ENST00000374685 ARID5BQ14865 1188 aa21■□□□□ 0.95
RXRB-202ENST00000374685 MSL1Q68DK7 614 aa21■□□□□ 0.95
RXRB-202ENST00000374685 CD209Q9NNX6 404 aa21■□□□□ 0.95
RXRB-202ENST00000374685 ARPP21Q9UBL0 812 aaPredicted RBP21■□□□□ 0.95
RXRB-202ENST00000374685 A0A1B0GUL6 1792 aa21■□□□□ 0.95
RXRB-202ENST00000374685 NOLC1Q14978 699 aaKnown RBP eCLIP21■□□□□ 0.95
RXRB-202ENST00000374685 PKN1Q16512 942 aa21■□□□□ 0.95
RXRB-202ENST00000374685 MFSD14BQ5SR56 506 aa21■□□□□ 0.95
RXRB-202ENST00000374685 RASGRP2Q7LDG7 609 aa21■□□□□ 0.95
RXRB-202ENST00000374685 SRBD1Q8N5C6 995 aaKnown RBP21■□□□□ 0.95
RXRB-202ENST00000374685 CNNM3Q8NE01 707 aa21■□□□□ 0.95
RXRB-202ENST00000374685 POLLQ9UGP5 575 aa21■□□□□ 0.95
RXRB-202ENST00000374685 USP49Q70CQ1 688 aa21■□□□□ 0.95
RXRB-202ENST00000374685 GRAMD1CQ8IYS0 662 aa21■□□□□ 0.95
RXRB-202ENST00000374685 KRI1Q8N9T8 703 aaKnown RBP21■□□□□ 0.95
RXRB-202ENST00000374685 RBM17Q96I25 401 aaKnown RBP21■□□□□ 0.95
RXRB-202ENST00000374685 KCNH3Q9ULD8 1083 aa21■□□□□ 0.95
RXRB-202ENST00000374685 TIAM2Q8IVF5 1701 aa20.99■□□□□ 0.95
RXRB-202ENST00000374685 TXNRD1Q16881 649 aa20.99■□□□□ 0.95
RXRB-202ENST00000374685 ZNF219Q9P2Y4 722 aaPredicted RBP20.99■□□□□ 0.95
RXRB-202ENST00000374685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.99■□□□□ 0.95
RXRB-202ENST00000374685 XBP1P17861 261 aa20.99■□□□□ 0.95
RXRB-202ENST00000374685 GTF2F1P35269 517 aaKnown RBP eCLIP20.99■□□□□ 0.95
RXRB-202ENST00000374685 BTDP43251 543 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms