RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 SPDYE6P0CI01 402 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 NT5C2P49902 561 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 CIAPIN1Q6FI81 312 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 CDC37L1Q7L3B6 337 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 ZBED3Q96IU2 234 aaPredicted RBP18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 SBF1O95248 1867 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 DICER1Q9UPY3 1922 aaKnown RBP18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 SHTN1A0MZ66 631 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 RCAN1P53805 252 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 HMGN5P82970 282 aaKnown RBP18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 ANKS1AQ92625 1134 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 TCP11L1Q9NUJ3 509 aa18.37■□□□□ 0.53
NIPAL3-204ENST00000374399 GREB1LQ9C091 1923 aaPredicted RBP18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 DDTLA6NHG4 134 aaPredicted RBP18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 FZD9O00144 591 aa18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 F13A1P00488 732 aa18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 TROAPQ12815 778 aa18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.36■□□□□ 0.53
NIPAL3-204ENST00000374399 DHX16O60231 1041 aaKnown RBP18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 PDCP20941 246 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 TCP10Q12799 353 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 MTMR14Q8NCE2 650 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 DNAJC18Q9H819 358 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 SHMT1P34896 483 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 NOVP48745 357 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 ZNF444Q8N0Y2 327 aaPredicted RBP18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 CHMP4CQ96CF2 233 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 SYT17Q9BSW7 474 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 EHD4Q9H223 541 aa18.35■□□□□ 0.53
NIPAL3-204ENST00000374399 ATRNL1Q5VV63 1379 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 UBE2Q2LH0YL09 131 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 NBPF11Q86T75 865 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 DGKHQ86XP1 1220 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 FANCBQ8NB91 859 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 NEDD1Q8NHV4 660 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 SERPINB13Q9UIV8 391 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 HDAC9Q9UKV0 1011 aa18.34■□□□□ 0.53
NIPAL3-204ENST00000374399 CPLX1O14810 134 aa18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 FUT2Q10981 343 aa18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 RTN1Q16799 776 aa18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 FAM184AQ8NB25 1140 aa18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 PHKBQ93100 1093 aa18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 ZNF287Q9HBT7 754 aa18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 ORC3Q9UBD5 711 aaPredicted RBP18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 ZNF70Q9UC06 446 aaPredicted RBP18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 COL2A1P02458 1487 aaPredicted RBP18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.52
NIPAL3-204ENST00000374399 ENTPD3O75355 529 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 IFNAR1P17181 557 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 TNIP1Q15025 636 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 DLGAP5Q15398 846 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 SPDYE2Q495Y8 402 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 OGFOD1Q8N543 542 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 DHX36Q9H2U1 1008 aaKnown RBP18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 ZNF541Q9H0D2 1346 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 CNTNAP1P78357 1384 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 IGKV6D-41A0A0C4DH26 115 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 DDAH1O94760 285 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 EGFRP00533 1210 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 MCTP1Q6DN14 999 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 CMTR1Q8N1G2 835 aaKnown RBP18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 AIFM3Q96NN9 605 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 GJB4Q9NTQ9 266 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 SWAP70Q9UH65 585 aa18.32■□□□□ 0.52
NIPAL3-204ENST00000374399 AKR1B1P15121 316 aa18.31■□□□□ 0.52
NIPAL3-204ENST00000374399 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
NIPAL3-204ENST00000374399 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
NIPAL3-204ENST00000374399 CATIPQ7Z7H3 387 aa18.31■□□□□ 0.52
NIPAL3-204ENST00000374399 FERMT3Q86UX7 667 aa18.31■□□□□ 0.52
NIPAL3-204ENST00000374399 FAM196BA6NMK8 535 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 WNT10BO00744 389 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 FMNL1O95466 1100 aaPredicted RBP18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 HLA-DOAP06340 250 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 RPS12P25398 132 aaKnown RBP18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 FOSBP53539 338 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 RESTQ13127 1097 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 NBPF9Q3BBW0 867 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 ARHGAP27Q6ZUM4 889 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 MYOZ2Q9NPC6 264 aa18.3■□□□□ 0.52
NIPAL3-204ENST00000374399 LMBRD1Q9NUN5 540 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms