RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 CSRNP2Q9H175 543 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 EPS15P42566 896 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 EPSTI1Q96J88 318 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 UBE4AQ14139 1066 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 PTF1AQ7RTS3 328 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 CAGE1Q8TC20 777 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 BAZ2BQ9UIF8 2168 aaKnown RBP13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 FAM170AA1A519 330 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 NEMFO60524 1076 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 TRIM37O94972 964 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 KIF4BQ2VIQ3 1234 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 TDRD7Q8NHU6 1098 aaKnown RBP13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 KCNB2Q92953 911 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 CTNND2Q9UQB3 1225 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 C3orf67Q6ZVT6 689 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 GGA1Q9UJY5 639 aa13.43□□□□□ -0.26
PACSIN1-202ENST00000374043 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 CCDC150Q8NCX0 1101 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 KIAA1524Q8TCG1 905 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 ASIC1P78348 528 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 PTGDRQ13258 359 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 LRRC8AQ8IWT6 810 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 DESI2Q9BSY9 194 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 FRMPD2Q68DX3 1309 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 ZNF76P36508 570 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 GSTO1P78417 241 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 INF2Q27J81 1249 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 KRBA2Q6ZNG9 492 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 MTERF4Q7Z6M4 381 aaKnown RBP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 FAM84BQ96KN1 310 aaPredicted RBP13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
PACSIN1-202ENST00000374043 CALM1P0DP23 149 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 CALM2P0DP24 149 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 CALM3P0DP25 149 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 NAA30Q147X3 362 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 DTHD1Q6ZMT9 781 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 ARGLU1Q9NWB6 273 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 IFNAR1P17181 557 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 TXKP42681 527 aa13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 FMR1NBQ8N0W7 255 aaPredicted RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
PACSIN1-202ENST00000374043 NFAT5O94916 1531 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 CASQ1P31415 396 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 TCEAL9Q9UHQ7 104 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 ARID4AP29374 1257 aaPredicted RBP13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 ENAHQ8N8S7 591 aaPredicted RBP13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 CCP110O43303 1012 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 CCNT1O60563 726 aaKnown RBP13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 MMP1P03956 469 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 KIAA1328Q86T90 577 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 WDR66Q8TBY9 1149 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 A0A1W2PQ27 194 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 A0A1W2PQ64 194 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 A0A1W2PQD8 194 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 GRIN1Q05586 938 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 TAB2Q9NYJ8 693 aa13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
PACSIN1-202ENST00000374043 BTDP43251 543 aa13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 RBM28Q9NW13 759 aaKnown RBP13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 POLR3GO15318 223 aaPredicted RBP13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 DRC1Q96MC2 740 aa13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 CCDC43Q96MW1 224 aaKnown RBP13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 EYA3Q99504 573 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms