RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 SSC5DA1L4H1 1573 aa14.63□□□□□ -0.07
A1CF-203ENST00000373995 EPB41L2O43491 1005 aaKnown RBP14.63□□□□□ -0.07
A1CF-203ENST00000373995 TOMM70O94826 608 aa14.63□□□□□ -0.07
A1CF-203ENST00000373995 REC8O95072 547 aa14.63□□□□□ -0.07
A1CF-203ENST00000373995 TDO2P48775 406 aa14.63□□□□□ -0.07
A1CF-203ENST00000373995 EVX2Q03828 476 aa14.63□□□□□ -0.07
A1CF-203ENST00000373995 MYBPC2Q14324 1141 aa14.63□□□□□ -0.07
A1CF-203ENST00000373995 USP48Q86UV5 1035 aa14.63□□□□□ -0.07
A1CF-203ENST00000373995 METTL16Q86W50 562 aaKnown RBP14.63□□□□□ -0.07
A1CF-203ENST00000373995 SIPA1L1O43166 1804 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 SEC24BO95487 1268 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 PLCD1P51178 756 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 MAP3K10Q02779 954 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 ZKSCAN8Q15776 578 aaPredicted RBP14.62□□□□□ -0.07
A1CF-203ENST00000373995 PRAMEF18Q5VWM3 479 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 CSRNP1Q96S65 589 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 EHD4Q9H223 541 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 PI4KBQ9UBF8 816 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 MYH1P12882 1939 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 CYP2D7A0A087X1C5 515 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 SMIM22K7EJ46 135 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 CYP2D6P10635 497 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
A1CF-203ENST00000373995 TTC6Q86TZ1 520 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 RBM46Q8TBY0 533 aaKnown RBP14.62□□□□□ -0.07
A1CF-203ENST00000373995 ROBO3Q96MS0 1386 aa14.62□□□□□ -0.07
A1CF-203ENST00000373995 ZSCAN20P17040 1043 aaPredicted RBP14.61□□□□□ -0.07
A1CF-203ENST00000373995 GABPAQ06546 454 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 ZSCAN29Q8IWY8 852 aaPredicted RBP14.61□□□□□ -0.07
A1CF-203ENST00000373995 CDCA5Q96FF9 252 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 ANAPC4Q9UJX5 808 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
A1CF-203ENST00000373995 TRAF5O00463 557 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 POLR3DP05423 398 aaPredicted RBP14.61□□□□□ -0.07
A1CF-203ENST00000373995 NECTIN1Q15223 517 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 SMC1BQ8NDV3 1235 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 TSPAN18Q96SJ8 248 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 DNAJC18Q9H819 358 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 CTNNA3Q9UI47 895 aa14.61□□□□□ -0.07
A1CF-203ENST00000373995 RBM8AQ9Y5S9 174 aaKnown RBP14.61□□□□□ -0.07
A1CF-203ENST00000373995 LAMB1P07942 1786 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 TBC1D12O60347 775 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 HLA-DOAP06340 250 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 PRR29P0C7W0 189 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 PPARAQ07869 468 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 SETDB1Q15047 1291 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 ARMCX6Q7L4S7 300 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 FOXP4Q8IVH2 680 aaPredicted RBP14.6□□□□□ -0.07
A1CF-203ENST00000373995 USP26Q9BXU7 913 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 SERPINB13Q9UIV8 391 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 PASKQ96RG2 1323 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 SLURP2P0DP57 97 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 SUPT20HL1Q3ZLR7 823 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 AMOTL1Q8IY63 956 aa14.6□□□□□ -0.07
A1CF-203ENST00000373995 HERC5Q9UII4 1024 aaKnown RBP14.6□□□□□ -0.07
A1CF-203ENST00000373995 LAMA4Q16363 1823 aa14.59□□□□□ -0.07
A1CF-203ENST00000373995 MINDY4BA8MYZ0 360 aa14.59□□□□□ -0.07
A1CF-203ENST00000373995 CYP21A2P08686 494 aa14.59□□□□□ -0.07
A1CF-203ENST00000373995 FMR1Q06787 632 aaKnown RBP eCLIP14.59□□□□□ -0.07
A1CF-203ENST00000373995 MKL1Q969V6 931 aa14.59□□□□□ -0.07
A1CF-203ENST00000373995 BACH2Q9BYV9 841 aa14.59□□□□□ -0.07
A1CF-203ENST00000373995 FGRP09769 529 aa14.58□□□□□ -0.07
A1CF-203ENST00000373995 IMMTQ16891 758 aaKnown RBP14.58□□□□□ -0.07
A1CF-203ENST00000373995 HOOK2Q96ED9 719 aa14.58□□□□□ -0.07
A1CF-203ENST00000373995 ZNF213O14771 459 aa14.58□□□□□ -0.08
A1CF-203ENST00000373995 HSPA4P34932 840 aa14.58□□□□□ -0.08
A1CF-203ENST00000373995 FSTL1Q12841 308 aa14.58□□□□□ -0.08
A1CF-203ENST00000373995 MTA1Q13330 715 aa14.58□□□□□ -0.08
A1CF-203ENST00000373995 C16orf86Q6ZW13 317 aa14.58□□□□□ -0.08
A1CF-203ENST00000373995 DYNLL2Q96FJ2 89 aa14.58□□□□□ -0.08
A1CF-203ENST00000373995 TACC3Q9Y6A5 838 aa14.58□□□□□ -0.08
A1CF-203ENST00000373995 HAND2P61296 217 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 TATDN1Q6P1N9 297 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 MIGA2Q7L4E1 593 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 TBC1D10CQ8IV04 446 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 KCNB2Q92953 911 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.57□□□□□ -0.08
A1CF-203ENST00000373995 TAF6LQ9Y6J9 622 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 SHMT1P34896 483 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 TERF1P54274 439 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 CREB3L3Q68CJ9 461 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 ANKRD23Q86SG2 305 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 SLC44A5Q8NCS7 719 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 SWAP70Q9UH65 585 aa14.57□□□□□ -0.08
A1CF-203ENST00000373995 PHF20L1A8MW92 1017 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 SLC27A2O14975 620 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 CDK8P49336 464 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 CTDSPL2Q05D32 466 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 MAP3K11Q16584 847 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 CST9Q5W186 159 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 DCAF15Q66K64 600 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 RNF217Q8TC41 542 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 STAG1Q8WVM7 1258 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 ZNF112Q9UJU3 913 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 PAPPA2Q9BXP8 1791 aa14.56□□□□□ -0.08
A1CF-203ENST00000373995 USP2O75604 605 aaPredicted RBP14.56□□□□□ -0.08
A1CF-203ENST00000373995 PCP11498 1178 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms