RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 DDNO94850 711 aaPredicted RBP16.36■□□□□ 0.21
A1CF-202ENST00000373993 CPA1P15085 419 aa16.36■□□□□ 0.21
A1CF-202ENST00000373993 GYS2P54840 703 aa16.36■□□□□ 0.21
A1CF-202ENST00000373993 CLASRPQ8N2M8 674 aaKnown RBP16.36■□□□□ 0.21
A1CF-202ENST00000373993 BRF1Q92994 677 aa16.36■□□□□ 0.21
A1CF-202ENST00000373993 LARP6Q9BRS8 491 aaKnown RBP16.36■□□□□ 0.21
A1CF-202ENST00000373993 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
A1CF-202ENST00000373993 VWA3AA6NCI4 1184 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 H3BQF6 201 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 MCM3P25205 808 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 FANCCQ00597 558 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 CXorf56Q9H5V9 222 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 IL1RAPL2Q9NP60 686 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
A1CF-202ENST00000373993 RFX7Q2KHR2 1363 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
A1CF-202ENST00000373993 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
A1CF-202ENST00000373993 VEGFAP15692 232 aaPredicted RBP16.35■□□□□ 0.21
A1CF-202ENST00000373993 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
A1CF-202ENST00000373993 NCAPHQ15003 741 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
A1CF-202ENST00000373993 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 RTEL1Q9NZ71 1219 aa16.35■□□□□ 0.21
A1CF-202ENST00000373993 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
A1CF-202ENST00000373993 AARSP49588 968 aaKnown RBP eCLIP16.34■□□□□ 0.21
A1CF-202ENST00000373993 ELOA2Q8IYF1 753 aaPredicted RBP16.34■□□□□ 0.21
A1CF-202ENST00000373993 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
A1CF-202ENST00000373993 SDF4Q9BRK5 362 aa16.34■□□□□ 0.21
A1CF-202ENST00000373993 WDR90Q96KV7 1748 aa16.34■□□□□ 0.21
A1CF-202ENST00000373993 YEATS4O95619 227 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 FSIP1Q8NA03 581 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 KIFC2Q96AC6 838 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 CCDC34Q96HJ3 373 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 MYD88Q99836 296 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 GOLPH3LQ9H4A5 285 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 VPS18Q9P253 973 aa16.33■□□□□ 0.21
A1CF-202ENST00000373993 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
A1CF-202ENST00000373993 LRRC31Q6UY01 552 aa16.33■□□□□ 0.2
A1CF-202ENST00000373993 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
A1CF-202ENST00000373993 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
A1CF-202ENST00000373993 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
A1CF-202ENST00000373993 TMX4Q9H1E5 349 aaPredicted RBP16.33■□□□□ 0.2
A1CF-202ENST00000373993 MED23Q9ULK4 1368 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.32■□□□□ 0.2
A1CF-202ENST00000373993 POTECB2RU33 542 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 PFKFB2O60825 505 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 ALDH1L1O75891 902 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 HTRA3P83110 453 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
A1CF-202ENST00000373993 ANKRD20A12PQ8NF67 263 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 DRC1Q96MC2 740 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 SNED1Q8TER0 1413 aa16.32■□□□□ 0.2
A1CF-202ENST00000373993 MAP2K2P36507 400 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 GNG11P61952 73 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
A1CF-202ENST00000373993 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
A1CF-202ENST00000373993 TMEM139Q8IV31 216 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 NAA15Q9BXJ9 866 aaKnown RBP16.31■□□□□ 0.2
A1CF-202ENST00000373993 PDE11AQ9HCR9 933 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 CDC23Q9UJX2 597 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 CUTAO60888 179 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 WDR93Q6P2C0 686 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 SPATS2Q86XZ4 545 aaKnown RBP16.31■□□□□ 0.2
A1CF-202ENST00000373993 SMC1BQ8NDV3 1235 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 JDP2Q8WYK2 163 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 PSMD1Q99460 953 aa16.31■□□□□ 0.2
A1CF-202ENST00000373993 SLC3A2P08195 630 aaKnown RBP16.3■□□□□ 0.2
A1CF-202ENST00000373993 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
A1CF-202ENST00000373993 UBASH3AP57075 661 aa16.3■□□□□ 0.2
A1CF-202ENST00000373993 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
A1CF-202ENST00000373993 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
A1CF-202ENST00000373993 TUBE1Q9UJT0 475 aa16.3■□□□□ 0.2
A1CF-202ENST00000373993 COL4A5P29400 1685 aa16.3■□□□□ 0.2
A1CF-202ENST00000373993 FANCGO15287 622 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 SHOX2O60902 331 aaPredicted RBP16.29■□□□□ 0.2
A1CF-202ENST00000373993 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
A1CF-202ENST00000373993 CALRP27797 417 aaKnown RBP16.29■□□□□ 0.2
A1CF-202ENST00000373993 APLP1P51693 650 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 LARGE2Q8N3Y3 721 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 PCNTO95613 3336 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 IRS4O14654 1257 aaPredicted RBP16.29■□□□□ 0.2
A1CF-202ENST00000373993 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 POTEJP0CG39 1038 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 SATB1Q01826 763 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 MYL5Q02045 173 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 FSTL1Q12841 308 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 BAG1Q99933 345 aaPredicted RBP16.29■□□□□ 0.2
A1CF-202ENST00000373993 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 MYO1AQ9UBC5 1043 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 AKAP2Q9Y2D5 859 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 MAP3K2Q9Y2U5 619 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
A1CF-202ENST00000373993 PPIP5K2O43314 1243 aa16.28■□□□□ 0.2
A1CF-202ENST00000373993 GRAPQ13588 217 aa16.28■□□□□ 0.2
A1CF-202ENST00000373993 AOC3Q16853 763 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms