RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 APOA5Q6Q788 366 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 ZNF34Q8IZ26 560 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 LARGE2Q8N3Y3 721 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 CCDC150Q8NCX0 1101 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 ZNF609O15014 1411 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 FAM196BA6NMK8 535 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 ZNF500O60304 480 aaPredicted RBP8.87□□□□□ -0.99
HERC4-202ENST00000373700 WDR78Q5VTH9 848 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 LRRC47Q8N1G4 583 aaKnown RBP8.87□□□□□ -0.99
HERC4-202ENST00000373700 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
HERC4-202ENST00000373700 TRERF1Q96PN7 1200 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 CEP89Q96ST8 783 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 NFE2L3Q9Y4A8 694 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 CARMIL3Q8ND23 1372 aa8.87□□□□□ -0.99
HERC4-202ENST00000373700 PPIP5K2O43314 1243 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 EN1Q05925 392 aaPredicted RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 NR5A1Q13285 461 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 VPS72Q15906 364 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 CLEC17AQ6ZS10 378 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 BLZF1Q9H2G9 400 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 BMP2KQ9NSY1 1161 aaPredicted RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 USP40Q9NVE5 1235 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 SERTAD1Q9UHV2 236 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 FBXO3Q9UK99 471 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 PAXBP1Q9Y5B6 917 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 JCADQ9P266 1359 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 PEAK1Q9H792 1746 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 KIF2AO00139 706 aaPredicted RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 DEXIO95424 95 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 CYB5R4Q7L1T6 521 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 GRAMD1CQ8IYS0 662 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 CACTINQ8WUQ7 758 aaKnown RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 VPS16Q9H269 839 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 FRMPD2Q68DX3 1309 aaPredicted RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 BAZ2BQ9UIF8 2168 aaKnown RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 U2AF2P26368 475 aaKnown RBP eCLIP8.86□□□□□ -0.994e-7■■■□□ 16.6
HERC4-202ENST00000373700 LETM2Q2VYF4 491 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 RILPL1Q5EBL4 403 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 JAKMIP3Q5VZ66 844 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 ATL3Q6DD88 541 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 KANK3Q6NY19 840 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 FANCBQ8NB91 859 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 DRC1Q96MC2 740 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 CLRN2A0PK11 232 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 CHMP4BP1P59074 171 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 RASGRP4Q8TDF6 673 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 CCDC102AQ96A19 550 aa8.86□□□□□ -0.99
HERC4-202ENST00000373700 FAM84BQ96KN1 310 aaPredicted RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 SCAF8Q9UPN6 1271 aaKnown RBP8.86□□□□□ -0.99
HERC4-202ENST00000373700 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 RAD17O75943 681 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 YEATS4O95619 227 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 CSF1RP07333 972 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 AXDND1Q5T1B0 1012 aaPredicted RBP8.85□□□□□ -0.99
HERC4-202ENST00000373700 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 FANCLQ9NW38 375 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 RCOR1Q9UKL0 485 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 RPAP1Q9BWH6 1393 aaPredicted RBP8.85□□□□□ -0.99
HERC4-202ENST00000373700 NEDD4P46934 1319 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 SALL3Q9BXA9 1300 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 NTSR2O95665 410 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 CDC25AP30304 524 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 MATR3P43243 847 aaKnown RBP eCLIP8.85□□□□□ -0.999e-6■■■■□ 23
HERC4-202ENST00000373700 ADKP55263 362 aaKnown RBP8.85□□□□□ -0.99
HERC4-202ENST00000373700 ASIC1P78348 528 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 TTLL12Q14166 644 aaPredicted RBP8.85□□□□□ -0.99
HERC4-202ENST00000373700 LONRF3Q496Y0 759 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 MXD3Q9BW11 206 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 BCS1LQ9Y276 419 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 PCDHA5Q9Y5H7 936 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 XDHP47989 1333 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 TRIM21P19474 475 aaKnown RBP8.85□□□□□ -0.99
HERC4-202ENST00000373700 TDRD12Q587J7 1177 aaKnown RBP8.85□□□□□ -0.99
HERC4-202ENST00000373700 CCDC181Q5TID7 509 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 CACNA2D4Q7Z3S7 1137 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 TXNRD3Q86VQ6 643 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 NOSTRINQ8IVI9 506 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 NLGN1Q8N2Q7 840 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 MYRIPQ8NFW9 859 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 EYA3Q99504 573 aa8.85□□□□□ -0.99
HERC4-202ENST00000373700 TCP10L2B9ZVM9 353 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 PPEF1O14829 653 aaPredicted RBP8.84□□□□□ -0.99
HERC4-202ENST00000373700 CHRNA5P30532 468 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 CASP7P55210 303 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 NLRP12P59046 1061 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 LINC00301Q8NCQ3 95 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
HERC4-202ENST00000373700 RUFY1Q96T51 708 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 SEPT11Q9NVA2 429 aaKnown RBP8.84□□□□□ -0.99
HERC4-202ENST00000373700 PUF60Q9UHX1 559 aaKnown RBP8.84□□□□□ -0.99
HERC4-202ENST00000373700 UTYO14607 1347 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 C21orf2O43822 256 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 CUTAO60888 179 aa8.84□□□□□ -0.99
HERC4-202ENST00000373700 ZBTB7AO95365 584 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms