RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 FBXO2Q9UK22 296 aaPredicted RBP27.43■■□□□ 1.98
CDK9-201ENST00000373264 PRR29P0C7W0 189 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 MECOMQ03112 1051 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 RGS22Q8NE09 1264 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 WASF1Q92558 559 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 ANAPC4Q9UJX5 808 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 FAM237AA0A1B0GTK4 181 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 PKN1Q16512 942 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 ARMCX5Q6P1M9 558 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 MYH13Q9UKX3 1938 aa27.42■■□□□ 1.98
CDK9-201ENST00000373264 NSUN4Q96CB9 384 aaKnown RBP27.41■■□□□ 1.98
CDK9-201ENST00000373264 RPS8P62241 208 aaKnown RBP27.41■■□□□ 1.98
CDK9-201ENST00000373264 ZNF827Q17R98 1081 aa27.41■■□□□ 1.98
CDK9-201ENST00000373264 FAM47AQ5JRC9 791 aa27.41■■□□□ 1.98
CDK9-201ENST00000373264 FBXO33Q7Z6M2 555 aa27.4■■□□□ 1.98
CDK9-201ENST00000373264 V9GY48 417 aaPredicted RBP27.4■■□□□ 1.98
CDK9-201ENST00000373264 MYH6P13533 1939 aa27.4■■□□□ 1.98
CDK9-201ENST00000373264 GNPATO15228 680 aa27.4■■□□□ 1.98
CDK9-201ENST00000373264 POLR2DO15514 142 aaKnown RBP27.4■■□□□ 1.98
CDK9-201ENST00000373264 FANCCQ00597 558 aa27.4■■□□□ 1.98
CDK9-201ENST00000373264 NAA30Q147X3 362 aaPredicted RBP27.4■■□□□ 1.98
CDK9-201ENST00000373264 NBPF5PQ86XG9 351 aaPredicted RBP27.4■■□□□ 1.98
CDK9-201ENST00000373264 TMTC2Q8N394 836 aa27.4■■□□□ 1.98
CDK9-201ENST00000373264 FOXP1Q9H334 677 aaPredicted RBP27.4■■□□□ 1.98
CDK9-201ENST00000373264 DUOX1Q9NRD9 1551 aa27.39■■□□□ 1.98
CDK9-201ENST00000373264 SCN7AQ01118 1682 aa27.39■■□□□ 1.98
CDK9-201ENST00000373264 FUT2Q10981 343 aa27.39■■□□□ 1.98
CDK9-201ENST00000373264 SERTAD1Q9UHV2 236 aa27.39■■□□□ 1.98
CDK9-201ENST00000373264 MDM2Q00987 491 aaPredicted RBP27.39■■□□□ 1.97
CDK9-201ENST00000373264 IFIT1BQ5T764 474 aaKnown RBP27.39■■□□□ 1.97
CDK9-201ENST00000373264 CCDC196A0A1B0GTZ2 297 aa27.38■■□□□ 1.97
CDK9-201ENST00000373264 PTPREP23469 700 aa27.38■■□□□ 1.97
CDK9-201ENST00000373264 GOLGA8FQ08AF8 430 aa27.38■■□□□ 1.97
CDK9-201ENST00000373264 GOLGA8DPQ0D2H9 430 aa27.38■■□□□ 1.97
CDK9-201ENST00000373264 EP400Q96L91 3159 aa27.38■■□□□ 1.97
CDK9-201ENST00000373264 VEGFAP15692 232 aaPredicted RBP27.38■■□□□ 1.97
CDK9-201ENST00000373264 SETDB2Q96T68 719 aa27.38■■□□□ 1.97
CDK9-201ENST00000373264 LTBP4Q8N2S1 1624 aa27.37■■□□□ 1.97
CDK9-201ENST00000373264 ADAMTS3O15072 1205 aa27.37■■□□□ 1.97
CDK9-201ENST00000373264 OSBPL5Q9H0X9 879 aaPredicted RBP27.37■■□□□ 1.97
CDK9-201ENST00000373264 FANCLQ9NW38 375 aa27.37■■□□□ 1.97
CDK9-201ENST00000373264 SLC10A5Q5PT55 438 aa27.36■■□□□ 1.97
CDK9-201ENST00000373264 NGLY1Q96IV0 654 aa27.36■■□□□ 1.97
CDK9-201ENST00000373264 BRIP1Q9BX63 1249 aa27.36■■□□□ 1.97
CDK9-201ENST00000373264 CSRNP2Q9H175 543 aa27.36■■□□□ 1.97
CDK9-201ENST00000373264 TROAPQ12815 778 aa27.36■■□□□ 1.97
CDK9-201ENST00000373264 RILPL1Q5EBL4 403 aa27.36■■□□□ 1.97
CDK9-201ENST00000373264 NLRP3Q96P20 1036 aa27.36■■□□□ 1.97
CDK9-201ENST00000373264 TMEM232C9JQI7 657 aa27.35■■□□□ 1.97
CDK9-201ENST00000373264 DCP1AQ9NPI6 582 aaPredicted RBP27.35■■□□□ 1.97
CDK9-201ENST00000373264 NARFQ9UHQ1 456 aa27.35■■□□□ 1.97
CDK9-201ENST00000373264 SMTNL1A8MU46 457 aa27.35■■□□□ 1.97
CDK9-201ENST00000373264 HIBADHP31937 336 aaKnown RBP27.35■■□□□ 1.97
CDK9-201ENST00000373264 A0A087X0B3 334 aa27.34■■□□□ 1.97
CDK9-201ENST00000373264 CEP135Q66GS9 1140 aa27.34■■□□□ 1.97
CDK9-201ENST00000373264 GPR101Q96P66 508 aaPredicted RBP27.34■■□□□ 1.97
CDK9-201ENST00000373264 RNF26Q9BY78 433 aaPredicted RBP27.34■■□□□ 1.97
CDK9-201ENST00000373264 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
CDK9-201ENST00000373264 IKBKBO14920 756 aa27.34■■□□□ 1.97
CDK9-201ENST00000373264 CASP1P29466 404 aa27.34■■□□□ 1.97
CDK9-201ENST00000373264 MYL5Q02045 173 aa27.34■■□□□ 1.97
CDK9-201ENST00000373264 CCAR2Q8N163 923 aaKnown RBP27.34■■□□□ 1.97
CDK9-201ENST00000373264 MAN1B1Q9UKM7 699 aa27.34■■□□□ 1.97
CDK9-201ENST00000373264 NEMFO60524 1076 aa27.33■■□□□ 1.97
CDK9-201ENST00000373264 CATIPQ7Z7H3 387 aa27.33■■□□□ 1.97
CDK9-201ENST00000373264 EPSTI1Q96J88 318 aa27.33■■□□□ 1.97
CDK9-201ENST00000373264 MTA3Q9BTC8 594 aa27.33■■□□□ 1.97
CDK9-201ENST00000373264 AKAP17AQ02040 695 aaKnown RBP27.33■■□□□ 1.97
CDK9-201ENST00000373264 FMR1Q06787 632 aaKnown RBP eCLIP27.33■■□□□ 1.97
CDK9-201ENST00000373264 E4F1Q66K89 784 aaPredicted RBP27.33■■□□□ 1.97
CDK9-201ENST00000373264 NYAP1Q6ZVC0 841 aa27.33■■□□□ 1.97
CDK9-201ENST00000373264 TRMT44Q8IYL2 757 aaKnown RBP27.33■■□□□ 1.97
CDK9-201ENST00000373264 TM4SF1P30408 202 aa27.32■■□□□ 1.96
CDK9-201ENST00000373264 POSTNQ15063 836 aa27.32■■□□□ 1.96
CDK9-201ENST00000373264 SRBD1Q8N5C6 995 aaKnown RBP27.32■■□□□ 1.96
CDK9-201ENST00000373264 PHF20Q9BVI0 1012 aa27.32■■□□□ 1.96
CDK9-201ENST00000373264 ZPR1O75312 459 aa27.32■■□□□ 1.96
CDK9-201ENST00000373264 IQCA1Q86XH1 822 aa27.32■■□□□ 1.96
CDK9-201ENST00000373264 ARHGEF1Q92888 912 aaKnown RBP27.32■■□□□ 1.96
CDK9-201ENST00000373264 CTIFO43310 598 aaKnown RBP27.31■■□□□ 1.96
CDK9-201ENST00000373264 RPS6KA4O75676 772 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 SERPINC1P01008 464 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 UBASH3AP57075 661 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 TPM4P67936 248 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 NPY5RQ15761 445 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 GRIK5Q16478 980 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.31■■□□□ 1.96
CDK9-201ENST00000373264 SRPRBQ9Y5M8 271 aaKnown RBP27.31■■□□□ 1.96
CDK9-201ENST00000373264 USP17L8P0C7I0 530 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 GSDMDP57764 484 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 MED15Q96RN5 788 aa27.31■■□□□ 1.96
CDK9-201ENST00000373264 FGRP09769 529 aa27.3■■□□□ 1.96
CDK9-201ENST00000373264 RCAN1P53805 252 aa27.3■■□□□ 1.96
CDK9-201ENST00000373264 PTPN14Q15678 1187 aa27.3■■□□□ 1.96
CDK9-201ENST00000373264 INTS13Q9NVM9 706 aa27.3■■□□□ 1.96
CDK9-201ENST00000373264 IMPACTQ9P2X3 320 aa27.3■■□□□ 1.96
CDK9-201ENST00000373264 ACTN4O43707 911 aaKnown RBP27.3■■□□□ 1.96
CDK9-201ENST00000373264 ZNF174Q15697 407 aa27.3■■□□□ 1.96
CDK9-201ENST00000373264 CFAP100Q494V2 611 aa27.3■■□□□ 1.96
CDK9-201ENST00000373264 CCNL1Q9UK58 526 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms