RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 CNKSR2Q8WXI2 1034 aa19.38■□□□□ 0.69
TMEM53-203ENST00000372242 SLC10A4Q96EP9 437 aa19.38■□□□□ 0.69
TMEM53-203ENST00000372242 GH2P01242 217 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 AKR1B1P15121 316 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 RRP12Q5JTH9 1297 aaKnown RBP19.37■□□□□ 0.69
TMEM53-203ENST00000372242 AKNAD1Q5T1N1 836 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 PAXIP1Q6ZW49 1069 aaPredicted RBP19.37■□□□□ 0.69
TMEM53-203ENST00000372242 TOMM22Q9NS69 142 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.37■□□□□ 0.69
TMEM53-203ENST00000372242 ATAD5Q96QE3 1844 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 MPHOSPH10O00566 681 aaKnown RBP19.37■□□□□ 0.69
TMEM53-203ENST00000372242 ZNF157P51786 506 aaPredicted RBP19.37■□□□□ 0.69
TMEM53-203ENST00000372242 GRM1Q13255 1194 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 ABCB5Q2M3G0 1257 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 NOL9Q5SY16 702 aaKnown RBP19.37■□□□□ 0.69
TMEM53-203ENST00000372242 CREB3L3Q68CJ9 461 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 RGMBQ6NW40 437 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 MFSD6Q6ZSS7 791 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 ZNF287Q9HBT7 754 aa19.37■□□□□ 0.69
TMEM53-203ENST00000372242 DOCK1Q14185 1865 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 NEDD4P46934 1319 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 SLC27A2O14975 620 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 FAM47AQ5JRC9 791 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 NKX2-3Q8TAU0 364 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 STAG1Q8WVM7 1258 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 USP26Q9BXU7 913 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 PICK1Q9NRD5 415 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 TAOK2Q9UL54 1235 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
TMEM53-203ENST00000372242 UNCXA6NJT0 531 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 FGRP09769 529 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 PTPRAP18433 802 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 MKRN3Q13064 507 aaKnown RBP19.35■□□□□ 0.69
TMEM53-203ENST00000372242 DEFB115Q30KQ5 88 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 CYP4F22Q6NT55 531 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 ZNF444Q8N0Y2 327 aaPredicted RBP19.35■□□□□ 0.69
TMEM53-203ENST00000372242 RASSF10A6NK89 507 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 RANBP6O60518 1105 aaKnown RBP19.35■□□□□ 0.69
TMEM53-203ENST00000372242 ASNSP08243 561 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 RAB3GAP1Q15042 981 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 OPTNQ96CV9 577 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 OTUD5Q96G74 571 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 HHIPL1Q96JK4 782 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 CCDC17Q96LX7 622 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 CABP5Q9NP86 173 aa19.35■□□□□ 0.69
TMEM53-203ENST00000372242 ORC4O43929 436 aa19.34■□□□□ 0.69
TMEM53-203ENST00000372242 GUCY1A2P33402 732 aa19.34■□□□□ 0.69
TMEM53-203ENST00000372242 GJA5P36382 358 aa19.34■□□□□ 0.69
TMEM53-203ENST00000372242 SEPT2Q15019 361 aa19.34■□□□□ 0.69
TMEM53-203ENST00000372242 STOX1Q6ZVD7 989 aa19.34■□□□□ 0.69
TMEM53-203ENST00000372242 RNF41Q9H4P4 317 aaPredicted RBP19.34■□□□□ 0.69
TMEM53-203ENST00000372242 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
TMEM53-203ENST00000372242 E7EWF7 191 aa19.33■□□□□ 0.69
TMEM53-203ENST00000372242 TFAP4Q01664 338 aa19.33■□□□□ 0.69
TMEM53-203ENST00000372242 ERO1BQ86YB8 467 aa19.33■□□□□ 0.69
TMEM53-203ENST00000372242 RASAL3Q86YV0 1011 aa19.33■□□□□ 0.69
TMEM53-203ENST00000372242 CLEC10AQ8IUN9 316 aa19.33■□□□□ 0.69
TMEM53-203ENST00000372242 RASEFQ8IZ41 740 aa19.33■□□□□ 0.69
TMEM53-203ENST00000372242 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.33■□□□□ 0.69
TMEM53-203ENST00000372242 SPDYE5A6NIY4 337 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 B4E1Z4 1266 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 TSPY3P0CV98 308 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 TSPY8P0CW00 308 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 HSPA4P34932 840 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 RNF20Q5VTR2 975 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 WNK4Q96J92 1243 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 TSPY2A6NKD2 308 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 TMEM179Q6ZVK1 233 aa19.32■□□□□ 0.68
TMEM53-203ENST00000372242 CEP350Q5VT06 3117 aa19.31■□□□□ 0.68
TMEM53-203ENST00000372242 USP17L5A8MUK1 530 aa19.31■□□□□ 0.68
TMEM53-203ENST00000372242 FAM155AB1AL88 458 aaPredicted RBP19.31■□□□□ 0.68
TMEM53-203ENST00000372242 IRF6O14896 467 aa19.31■□□□□ 0.68
TMEM53-203ENST00000372242 KDM4AO75164 1064 aa19.31■□□□□ 0.68
TMEM53-203ENST00000372242 SLC10A3P09131 477 aa19.31■□□□□ 0.68
TMEM53-203ENST00000372242 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
TMEM53-203ENST00000372242 SPRYD7Q5W111 196 aa19.31■□□□□ 0.68
TMEM53-203ENST00000372242 CAPNS2Q96L46 248 aa19.31■□□□□ 0.68
TMEM53-203ENST00000372242 PHIPQ8WWQ0 1821 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 NMT2O60551 498 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 PPATQ06203 517 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 COL9A3Q14050 684 aaPredicted RBP19.3■□□□□ 0.68
TMEM53-203ENST00000372242 ESR2Q92731 530 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 CCDC102AQ96A19 550 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 GINM1Q9NU53 330 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 TRIM75PA6NK02 468 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
TMEM53-203ENST00000372242 TRDNQ13061 729 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 NEDD1Q8NHV4 660 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 KRT23Q9C075 422 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 CNNM2Q9H8M5 875 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 ZSWIM5Q9P217 1185 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 AFG3L2Q9Y4W6 797 aa19.3■□□□□ 0.68
TMEM53-203ENST00000372242 GREB1LQ9C091 1923 aaPredicted RBP19.29■□□□□ 0.68
TMEM53-203ENST00000372242 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
TMEM53-203ENST00000372242 VEGFBP49765 207 aa19.29■□□□□ 0.68
TMEM53-203ENST00000372242 SPP2Q13103 211 aa19.29■□□□□ 0.68
TMEM53-203ENST00000372242 PPIL2Q13356 520 aa19.29■□□□□ 0.68
TMEM53-203ENST00000372242 ADCK5Q3MIX3 580 aa19.29■□□□□ 0.68
TMEM53-203ENST00000372242 CEP95Q96GE4 821 aa19.29■□□□□ 0.68
TMEM53-203ENST00000372242 ZIC5Q96T25 663 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms