RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 USP17L3A6NCW0 530 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 USP17L4A6NCW7 530 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 ZBTB7AO95365 584 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 PPP2R5BQ15173 497 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 RCSD1Q6JBY9 416 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 USP17L1Q7RTZ2 530 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 CMTR1Q8N1G2 835 aaKnown RBP18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 CRACR2BQ8N4Y2 399 aaPredicted RBP18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 TEKT1Q969V4 418 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 SPATA32Q96LK8 384 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 IL17RBQ9NRM6 502 aa18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 ZNF646O15015 1829 aaPredicted RBP18.13■□□□□ 0.49
GTF3C5-204ENST00000372108 ADAMTSL1Q8N6G6 1762 aa18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 MYH15Q9Y2K3 1946 aa18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 ECM29Q5VYK3 1845 aa18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 WDHD1O75717 1129 aaPredicted RBP18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 APOBEC3HQ6NTF7 200 aaKnown RBP18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 C16orf86Q6ZW13 317 aa18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 USP40Q9NVE5 1235 aa18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 CFAP45Q9UL16 551 aa18.12■□□□□ 0.49
GTF3C5-204ENST00000372108 DDAH1O94760 285 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 RASA1P20936 1047 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 GUCY1A2P33402 732 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CRKP46108 304 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 GRIPAP1Q4V328 841 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 DDX4Q9NQI0 724 aaKnown RBP18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 MYH1P12882 1939 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 KIF13BQ9NQT8 1826 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 PPIP5K2O43314 1243 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CALM1P0DP23 149 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CALM2P0DP24 149 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CALM3P0DP25 149 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CDK8P49336 464 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CCDC93Q567U6 631 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 KRT40Q6A162 431 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CDC42EP5Q6NZY7 148 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 KIAA0825Q8IV33 1275 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 RTKN2Q8IZC4 609 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 ZNF444Q8N0Y2 327 aaPredicted RBP18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 CCDC82Q8N4S0 544 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 MRIQ9BWK5 157 aa18.11■□□□□ 0.49
GTF3C5-204ENST00000372108 KIF28PB7ZC32 967 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 KIF23Q02241 960 aaPredicted RBP18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 PICALMQ13492 652 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 ATL3Q6DD88 541 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 TRIM22Q8IYM9 498 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 FTOQ9C0B1 505 aaKnown RBP eCLIP18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 TCP11L1Q9NUJ3 509 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 ISY1Q9ULR0 285 aaKnown RBP18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 YDJCA8MPS7 323 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 TSPY3P0CV98 308 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 TSPY8P0CW00 308 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 FUT2Q10981 343 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 DGKHQ86XP1 1220 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 WASF1Q92558 559 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 ZNF396Q96N95 335 aaPredicted RBP18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 USP28Q96RU2 1077 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 ZNF287Q9HBT7 754 aa18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 ATF5Q9Y2D1 282 aaPredicted RBP18.1■□□□□ 0.49
GTF3C5-204ENST00000372108 CEBPZQ03701 1054 aaKnown RBP18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 SYAP1Q96A49 352 aaPredicted RBP18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 PSMD1Q99460 953 aa18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 RBM28Q9NW13 759 aaKnown RBP18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 RCOR1Q9UKL0 485 aa18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 PCDHAC2Q9Y5I4 1007 aa18.09■□□□□ 0.49
GTF3C5-204ENST00000372108 PLEKHA8P1O95397 391 aa18.08■□□□□ 0.49
GTF3C5-204ENST00000372108 PGBD1Q96JS3 809 aa18.08■□□□□ 0.49
GTF3C5-204ENST00000372108 TAOK2Q9UL54 1235 aa18.08■□□□□ 0.49
GTF3C5-204ENST00000372108 SYCE3A1L190 88 aa18.08■□□□□ 0.48
GTF3C5-204ENST00000372108 DEXIO95424 95 aa18.08■□□□□ 0.48
GTF3C5-204ENST00000372108 HDLBPQ00341 1268 aaKnown RBP18.08■□□□□ 0.48
GTF3C5-204ENST00000372108 CCDC178Q5BJE1 867 aa18.08■□□□□ 0.48
GTF3C5-204ENST00000372108 TRIM29Q14134 588 aa18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 KAT14Q9H8E8 782 aa18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 XRCC6P12956 609 aaKnown RBP eCLIP18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 TGFB2P61812 414 aa18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 GABPAQ06546 454 aa18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 TMTC3Q6ZXV5 915 aa18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 MTFR1LQ9H019 292 aa18.07■□□□□ 0.48
GTF3C5-204ENST00000372108 MRE11P49959 708 aa18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 NFIAQ12857 509 aa18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 CCDC183Q5T5S1 534 aa18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 MYSM1Q5VVJ2 828 aa18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 NEDD1Q8NHV4 660 aa18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 CTCFLQ8NI51 663 aaPredicted RBP18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 OSBPL5Q9H0X9 879 aaPredicted RBP18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 GRPEL1Q9HAV7 217 aa18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 ZNF277Q9NRM2 450 aaPredicted RBP18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 SERPINA10Q9UK55 444 aa18.06■□□□□ 0.48
GTF3C5-204ENST00000372108 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 U2AF2P26368 475 aaKnown RBP eCLIP18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 PKN1Q16512 942 aa18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 PNMA1Q8ND90 353 aa18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 RTEL1Q9NZ71 1219 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms