RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 TMED8Q6PL24 325 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-204ENST00000372064 LAMB1P07942 1786 aa23.69■■□□□ 1.38
VEGFA-204ENST00000372064 FUT2Q10981 343 aa23.69■■□□□ 1.38
VEGFA-204ENST00000372064 KCNH3Q9ULD8 1083 aa23.69■■□□□ 1.38
VEGFA-204ENST00000372064 SMTNL1A8MU46 457 aa23.68■■□□□ 1.38
VEGFA-204ENST00000372064 IFIT1BQ5T764 474 aaKnown RBP23.68■■□□□ 1.38
VEGFA-204ENST00000372064 KRBA2Q6ZNG9 492 aa23.68■■□□□ 1.38
VEGFA-204ENST00000372064 FBXO2Q9UK22 296 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-204ENST00000372064 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.68■■□□□ 1.383e-16■□□□□ 9.2
VEGFA-204ENST00000372064 IRS2Q9Y4H2 1338 aa23.68■■□□□ 1.38
VEGFA-204ENST00000372064 RFC4P35249 363 aa23.68■■□□□ 1.38
VEGFA-204ENST00000372064 DCP1AQ9NPI6 582 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-204ENST00000372064 PTPREP23469 700 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 METTL16Q86W50 562 aaKnown RBP23.67■■□□□ 1.38
VEGFA-204ENST00000372064 IQCA1Q86XH1 822 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 OXER1Q8TDS5 423 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 MYH6P13533 1939 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 PKN1Q16512 942 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 LONRF3Q496Y0 759 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 SHISA4Q96DD7 197 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 CRNKL1Q9BZJ0 848 aaKnown RBP23.67■■□□□ 1.38
VEGFA-204ENST00000372064 OSBPL5Q9H0X9 879 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-204ENST00000372064 IMPACTQ9P2X3 320 aa23.67■■□□□ 1.38
VEGFA-204ENST00000372064 MORC2Q9Y6X9 1032 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-204ENST00000372064 ISM2Q6H9L7 571 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 RBM28Q9NW13 759 aaKnown RBP23.66■■□□□ 1.38
VEGFA-204ENST00000372064 KIAA1551Q9HCM1 1747 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 ORC4O43929 436 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 TPM4P67936 248 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 PNOCQ13519 176 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 ARID5BQ14865 1188 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 TRAPPC3LQ5T215 181 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 CATIPQ7Z7H3 387 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 ZNF579Q8NAF0 562 aaKnown RBP23.66■■□□□ 1.38
VEGFA-204ENST00000372064 hCG_1642624A0A1W2PR95 340 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 PRPF3O43395 683 aaKnown RBP23.66■■□□□ 1.38
VEGFA-204ENST00000372064 TROAPQ12815 778 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 SPECC1Q5M775 1068 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 FAM196AQ6ZSG2 479 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 TAF1LQ8IZX4 1826 aa23.66■■□□□ 1.38
VEGFA-204ENST00000372064 TNRC6CQ9HCJ0 1690 aaKnown RBP23.65■■□□□ 1.38
VEGFA-204ENST00000372064 PLEKHA8P1O95397 391 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 CALM1P0DP23 149 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 CALM2P0DP24 149 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 CALM3P0DP25 149 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 CYP2D6P10635 497 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 NFIXQ14938 502 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 LY75O60449 1722 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 DDAH1O94760 285 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 GSDMDP57764 484 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 RBM10P98175 930 aaKnown RBP23.65■■□□□ 1.38
VEGFA-204ENST00000372064 MDM2Q00987 491 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-204ENST00000372064 AKAP17AQ02040 695 aaKnown RBP23.65■■□□□ 1.38
VEGFA-204ENST00000372064 HSD3B7Q9H2F3 369 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 PDCL3Q9H2J4 239 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 ATP8A2Q9NTI2 1148 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 PCDHB6Q9Y5E3 794 aa23.65■■□□□ 1.38
VEGFA-204ENST00000372064 CCZ1BP86790 482 aa23.64■■□□□ 1.38
VEGFA-204ENST00000372064 CCZ1P86791 482 aaPredicted RBP23.64■■□□□ 1.38
VEGFA-204ENST00000372064 GRIN1Q05586 938 aa23.64■■□□□ 1.38
VEGFA-204ENST00000372064 CNNM3Q8NE01 707 aa23.64■■□□□ 1.38
VEGFA-204ENST00000372064 PHF20Q9BVI0 1012 aa23.64■■□□□ 1.38
VEGFA-204ENST00000372064 VPS54Q9P1Q0 977 aa23.64■■□□□ 1.38
VEGFA-204ENST00000372064 XPO4Q9C0E2 1151 aaKnown RBP23.64■■□□□ 1.37
VEGFA-204ENST00000372064 CEP131Q9UPN4 1083 aa23.64■■□□□ 1.37
VEGFA-204ENST00000372064 NMT2O60551 498 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 FILIP1Q7Z7B0 1213 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 FOXP4Q8IVH2 680 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-204ENST00000372064 ANKIB1Q9P2G1 1089 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 SRPRBQ9Y5M8 271 aaKnown RBP23.63■■□□□ 1.37
VEGFA-204ENST00000372064 CCDC88AQ3V6T2 1871 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 XBP1P17861 261 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 ATP2B1P20020 1258 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 SBK1Q52WX2 424 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 FAM47AQ5JRC9 791 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 FAM13BQ9NYF5 915 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 DZIP1Q86YF9 867 aaKnown RBP23.63■■□□□ 1.37
VEGFA-204ENST00000372064 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-204ENST00000372064 CABP5Q9NP86 173 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 IFNKQ9P0W0 207 aa23.63■■□□□ 1.37
VEGFA-204ENST00000372064 V9GY48 417 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-204ENST00000372064 GRAPQ13588 217 aa23.62■■□□□ 1.37
VEGFA-204ENST00000372064 GRAPLQ8TC17 118 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-204ENST00000372064 KCND1Q9NSA2 647 aa23.62■■□□□ 1.37
VEGFA-204ENST00000372064 ARPP21Q9UBL0 812 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-204ENST00000372064 SKILP12757 684 aa23.62■■□□□ 1.37
VEGFA-204ENST00000372064 MAP7D2Q96T17 732 aa23.62■■□□□ 1.37
VEGFA-204ENST00000372064 SPATA31A6Q5VVP1 1343 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 SLC4A8Q2Y0W8 1093 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 TMTC3Q6ZXV5 915 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 CNBD1Q8NA66 436 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 LRRC4BQ9NT99 713 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 PCDHA5Q9Y5H7 936 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 SBF2Q86WG5 1849 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 FAM205CA6NFA0 338 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 IGSF3O75054 1194 aa23.61■■□□□ 1.37
VEGFA-204ENST00000372064 SMC2O95347 1197 aa23.6■■□□□ 1.37
VEGFA-204ENST00000372064 MYL5Q02045 173 aa23.6■■□□□ 1.37
VEGFA-204ENST00000372064 NT5DC1Q5TFE4 455 aa23.6■■□□□ 1.37
VEGFA-204ENST00000372064 NOL10Q9BSC4 688 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms