RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ADARB2Q9NS39 739 aaKnown RBP13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 IMPACTQ9P2X3 320 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
TSPAN1-201ENST00000372003 MECOMQ03112 1051 aa13.25□□□□□ -0.29
TSPAN1-201ENST00000372003 PTPN14Q15678 1187 aa13.25□□□□□ -0.29
TSPAN1-201ENST00000372003 CFAP100Q494V2 611 aa13.25□□□□□ -0.29
TSPAN1-201ENST00000372003 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
TSPAN1-201ENST00000372003 NRBP1Q9UHY1 535 aa13.25□□□□□ -0.29
TSPAN1-201ENST00000372003 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
TSPAN1-201ENST00000372003 NR1I2O75469 434 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 CRKP46108 304 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 MAP3K12Q12852 859 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 DLGAP5Q15398 846 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 KIF4BQ2VIQ3 1234 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 SMARCC2Q8TAQ2 1214 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 TEKT1Q969V4 418 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 DNAJC25Q9H1X3 360 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 ANO10Q9NW15 660 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 CCDC66A2RUB6 948 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 HMGB1P09429 215 aaKnown RBP13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 NBPF9Q3BBW0 867 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 NSUN4Q96CB9 384 aaKnown RBP13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 NAT10Q9H0A0 1025 aaKnown RBP13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 OSBPL5Q9H0X9 879 aaPredicted RBP13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 SERPINA10Q9UK55 444 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 MAST3O60307 1309 aa13.24□□□□□ -0.29
TSPAN1-201ENST00000372003 SLFN14P0C7P3 912 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 SLC9C2Q5TAH2 1124 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 USP50Q70EL3 339 aaPredicted RBP13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 ZNF771Q7L3S4 317 aaPredicted RBP13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 PNMA8AQ86V59 439 aaPredicted RBP13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 PRMT6Q96LA8 375 aaPredicted RBP13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 FAM227BQ96M60 508 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 ZNF396Q96N95 335 aaPredicted RBP13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 FSD1Q9BTV5 496 aa13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 TFIP11Q9UBB9 837 aaKnown RBP13.23□□□□□ -0.29
TSPAN1-201ENST00000372003 H3BQV1 296 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 WNT10BO00744 389 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 SLU7O95391 586 aaKnown RBP13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 CHGBP05060 677 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 SKILP12757 684 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 CYP7A1P22680 504 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 GSTO1P78417 241 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 HDLBPQ00341 1268 aaKnown RBP13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 SLF2Q8IX21 1173 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 BPIFA3Q9BQP9 254 aa13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
TSPAN1-201ENST00000372003 A0A0D9SFI3 127 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 CLRN2A0PK11 232 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 BECN2A8MW95 431 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 KIF3CO14782 793 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 LDHCP07864 332 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 MMP14P50281 582 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 CCZ1BP86790 482 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 CCZ1P86791 482 aaPredicted RBP13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 TERF2Q15554 542 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 CCAR2Q8N163 923 aaKnown RBP13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 KBTBD3Q8NAB2 608 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 BRF1Q92994 677 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 MRIQ9BWK5 157 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 TDRD3Q9H7E2 651 aaKnown RBP13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 DAGLAQ9Y4D2 1042 aa13.21□□□□□ -0.29
TSPAN1-201ENST00000372003 CCDC69A6NI79 296 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 CCP110O43303 1012 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 NRDCO43847 1150 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 PFKFB2O60825 505 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 PDE6AP16499 860 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 APOBEC3HQ6NTF7 200 aaKnown RBP13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 ADGRA1Q86SQ6 560 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 MIGA1Q8NAN2 632 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 ZDHHC15Q96MV8 337 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 L2HGDHQ9H9P8 463 aa13.21□□□□□ -0.3
TSPAN1-201ENST00000372003 WDR90Q96KV7 1748 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 MROH7-TTC4A0A0A0MT08 1334 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 ZNF532Q9HCE3 1301 aa13.2□□□□□ -0.3
TSPAN1-201ENST00000372003 MYO1BO43795 1136 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms