RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 ZNF287Q9HBT7 754 aa15.47■□□□□ 0.07
TTC39A-204ENST00000371750 PHF20L1A8MW92 1017 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
TTC39A-204ENST00000371750 TRDNQ13061 729 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 CYB5R4Q7L1T6 521 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 NEK1Q96PY6 1258 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 KRT23Q9C075 422 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 TAOK2Q9UL54 1235 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 PLIN4Q96Q06 1357 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 TOMM70O94826 608 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 CASTP20810 708 aaKnown RBP15.46■□□□□ 0.07
TTC39A-204ENST00000371750 JAG1P78504 1218 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 CERKLQ49MI3 558 aaPredicted RBP15.46■□□□□ 0.07
TTC39A-204ENST00000371750 MOB2Q70IA6 237 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 RBM46Q8TBY0 533 aaKnown RBP15.46■□□□□ 0.07
TTC39A-204ENST00000371750 ESR2Q92731 530 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 WRNIP1Q96S55 665 aa15.46■□□□□ 0.07
TTC39A-204ENST00000371750 UPF3BQ9BZI7 483 aaKnown RBP15.46■□□□□ 0.07
TTC39A-204ENST00000371750 TSPY2A6NKD2 308 aa15.45■□□□□ 0.06
TTC39A-204ENST00000371750 USP2O75604 605 aaPredicted RBP15.45■□□□□ 0.06
TTC39A-204ENST00000371750 INPP5BP32019 993 aa15.45■□□□□ 0.06
TTC39A-204ENST00000371750 ANTXR2P58335 489 aa15.45■□□□□ 0.06
TTC39A-204ENST00000371750 CHST3Q7LGC8 479 aa15.45■□□□□ 0.06
TTC39A-204ENST00000371750 ZNF444Q8N0Y2 327 aaPredicted RBP15.45■□□□□ 0.06
TTC39A-204ENST00000371750 TCEANC2Q96MN5 208 aa15.45■□□□□ 0.06
TTC39A-204ENST00000371750 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.45■□□□□ 0.06
TTC39A-204ENST00000371750 PASKQ96RG2 1323 aa15.45■□□□□ 0.06
TTC39A-204ENST00000371750 MPHOSPH10O00566 681 aaKnown RBP15.44■□□□□ 0.06
TTC39A-204ENST00000371750 CELF2O95319 508 aaKnown RBP15.44■□□□□ 0.06
TTC39A-204ENST00000371750 TSPY3P0CV98 308 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 TSPY8P0CW00 308 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 TFAP4Q01664 338 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 TTLL12Q14166 644 aaPredicted RBP15.44■□□□□ 0.06
TTC39A-204ENST00000371750 CLEC10AQ8IUN9 316 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.44■□□□□ 0.06
TTC39A-204ENST00000371750 KLRG1Q96E93 195 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 ZNF112Q9UJU3 913 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 ANGEL1Q9UNK9 670 aaKnown RBP15.44■□□□□ 0.06
TTC39A-204ENST00000371750 PPP1R12BO60237 982 aaPredicted RBP15.44■□□□□ 0.06
TTC39A-204ENST00000371750 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 BLOC1S2Q6QNY1 142 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 ZKSCAN3Q9BRR0 538 aa15.44■□□□□ 0.06
TTC39A-204ENST00000371750 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.44■□□□□ 0.06
TTC39A-204ENST00000371750 NMT2O60551 498 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 GH2P01242 217 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 PSMA5P28066 241 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 CAP2P40123 477 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 TM6SF1Q9BZW5 370 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 ZSWIM5Q9P217 1185 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 ZBTB21Q9ULJ3 1066 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 PRC1O43663 620 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 RPS6KB1P23443 525 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 IREB2P48200 963 aaKnown RBP15.43■□□□□ 0.06
TTC39A-204ENST00000371750 NEDD1Q8NHV4 660 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 ZKSCAN4Q969J2 545 aaPredicted RBP15.43■□□□□ 0.06
TTC39A-204ENST00000371750 CCDC17Q96LX7 622 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 LRRC2Q9BYS8 371 aa15.43■□□□□ 0.06
TTC39A-204ENST00000371750 GBA2Q9HCG7 927 aaPredicted RBP15.43■□□□□ 0.06
TTC39A-204ENST00000371750 PHIPQ8WWQ0 1821 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 GUCY1A2P33402 732 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 MCM5P33992 734 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 VGLL4Q14135 290 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 CST9Q5W186 159 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 RUFY3Q7L099 469 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
TTC39A-204ENST00000371750 CYP46A1Q9Y6A2 500 aa15.42■□□□□ 0.06
TTC39A-204ENST00000371750 IGKV6D-41A0A0C4DH26 115 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 CTNND1O60716 968 aaKnown RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 TNKSO95271 1327 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 EXOSC10Q01780 885 aaKnown RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 SEPT2Q15019 361 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 TMEM179Q6ZVK1 233 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 DHX32Q7L7V1 743 aaKnown RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 ARMC9Q7Z3E5 817 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 SCYL3Q8IZE3 742 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 GPHNQ9NQX3 736 aaPredicted RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 SNCAIPQ9Y6H5 919 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 MYH4Q9Y623 1939 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 UBE2Q2LH0YL09 131 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 NT5C2P49902 561 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 RAB3GAP1Q15042 981 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 NOL9Q5SY16 702 aaKnown RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 CEP95Q96GE4 821 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 CLMNQ96JQ2 1002 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 CABP5Q9NP86 173 aa15.41■□□□□ 0.06
TTC39A-204ENST00000371750 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
TTC39A-204ENST00000371750 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
TTC39A-204ENST00000371750 MAP3K9P80192 1104 aa15.4■□□□□ 0.06
TTC39A-204ENST00000371750 FSTL1Q12841 308 aa15.4■□□□□ 0.06
TTC39A-204ENST00000371750 RABEP1Q15276 862 aa15.4■□□□□ 0.06
TTC39A-204ENST00000371750 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
TTC39A-204ENST00000371750 ZSCAN10Q96SZ4 725 aaPredicted RBP15.4■□□□□ 0.06
TTC39A-204ENST00000371750 SH2B2O14492 632 aaPredicted RBP15.39■□□□□ 0.05
TTC39A-204ENST00000371750 IFIT3O14879 490 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms