RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 OTUD7BQ6GQQ9 843 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 NBPF11Q86T75 865 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 NUP133Q8WUM0 1156 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 ZDHHC15Q96MV8 337 aa20.43■□□□□ 0.86
SSBP3-203ENST00000371319 DDAH1O94760 285 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 RASA1P20936 1047 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 CSPP1Q1MSJ5 1256 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 CATIPQ7Z7H3 387 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 FBXO18Q8NFZ0 1043 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 AIFM3Q96NN9 605 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 ALG1Q9BT22 464 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 MKNK2Q9HBH9 465 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 IL17RBQ9NRM6 502 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 CCDC196A0A1B0GTZ2 297 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 CDK8P49336 464 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
SSBP3-203ENST00000371319 TROAPQ12815 778 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 PICALMQ13492 652 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 ILDR1Q86SU0 546 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-203ENST00000371319 ANKS1AQ92625 1134 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 SGIP1Q9BQI5 828 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 SLC26A6Q9BXS9 759 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 TCP11L1Q9NUJ3 509 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 PIM2Q9P1W9 311 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 PCDHAC2Q9Y5I4 1007 aa20.42■□□□□ 0.86
SSBP3-203ENST00000371319 CALM1P0DP23 149 aa20.41■□□□□ 0.86
SSBP3-203ENST00000371319 CALM2P0DP24 149 aa20.41■□□□□ 0.86
SSBP3-203ENST00000371319 CALM3P0DP25 149 aa20.41■□□□□ 0.86
SSBP3-203ENST00000371319 PPP2R5BQ15173 497 aa20.41■□□□□ 0.86
SSBP3-203ENST00000371319 CAVIN1Q6NZI2 390 aaKnown RBP20.41■□□□□ 0.86
SSBP3-203ENST00000371319 TTC6Q86TZ1 520 aa20.41■□□□□ 0.86
SSBP3-203ENST00000371319 UPF1Q92900 1129 aaKnown RBP eCLIP20.41■□□□□ 0.863e-13■□□□□ 10
SSBP3-203ENST00000371319 ZNF277Q9NRM2 450 aaPredicted RBP20.41■□□□□ 0.86
SSBP3-203ENST00000371319 GJB4Q9NTQ9 266 aa20.41■□□□□ 0.86
SSBP3-203ENST00000371319 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
SSBP3-203ENST00000371319 MYH6P13533 1939 aa20.4■□□□□ 0.86
SSBP3-203ENST00000371319 FER1L6Q2WGJ9 1857 aa20.4■□□□□ 0.86
SSBP3-203ENST00000371319 UBE2Q2LH0YL09 131 aa20.4■□□□□ 0.86
SSBP3-203ENST00000371319 UBE2HP62256 183 aa20.4■□□□□ 0.86
SSBP3-203ENST00000371319 SOGA3Q5TF21 947 aa20.4■□□□□ 0.86
SSBP3-203ENST00000371319 ZNF444Q8N0Y2 327 aaPredicted RBP20.4■□□□□ 0.86
SSBP3-203ENST00000371319 CRACR2BQ8N4Y2 399 aaPredicted RBP20.4■□□□□ 0.86
SSBP3-203ENST00000371319 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
SSBP3-203ENST00000371319 ZNF287Q9HBT7 754 aa20.4■□□□□ 0.86
SSBP3-203ENST00000371319 ELP1O95163 1332 aa20.39■□□□□ 0.86
SSBP3-203ENST00000371319 CCDC178Q5BJE1 867 aa20.39■□□□□ 0.85
SSBP3-203ENST00000371319 DGKHQ86XP1 1220 aa20.39■□□□□ 0.85
SSBP3-203ENST00000371319 OSBPL5Q9H0X9 879 aaPredicted RBP20.39■□□□□ 0.85
SSBP3-203ENST00000371319 RBM28Q9NW13 759 aaKnown RBP20.39■□□□□ 0.85
SSBP3-203ENST00000371319 TFIP11Q9UBB9 837 aaKnown RBP20.39■□□□□ 0.85
SSBP3-203ENST00000371319 SERPINA10Q9UK55 444 aa20.39■□□□□ 0.85
SSBP3-203ENST00000371319 TSPY3P0CV98 308 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 TSPY8P0CW00 308 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 GABPAQ06546 454 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 FUT2Q10981 343 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 LEO1Q8WVC0 666 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-203ENST00000371319 SCAND2PQ9GZW5 306 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-203ENST00000371319 TMEM63CQ9P1W3 806 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 SIPA1L1O43166 1804 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 MYH8P13535 1937 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 GUCY1A2P33402 732 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
SSBP3-203ENST00000371319 KRT40Q6A162 431 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 CMTR1Q8N1G2 835 aaKnown RBP20.38■□□□□ 0.85
SSBP3-203ENST00000371319 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
SSBP3-203ENST00000371319 FSD2A1L4K1 749 aa20.37■□□□□ 0.85
SSBP3-203ENST00000371319 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
SSBP3-203ENST00000371319 PLEKHA8P1O95397 391 aa20.37■□□□□ 0.85
SSBP3-203ENST00000371319 KIF23Q02241 960 aaPredicted RBP20.37■□□□□ 0.85
SSBP3-203ENST00000371319 NFIAQ12857 509 aa20.37■□□□□ 0.85
SSBP3-203ENST00000371319 TRIM22Q8IYM9 498 aa20.37■□□□□ 0.85
SSBP3-203ENST00000371319 NEDD1Q8NHV4 660 aa20.37■□□□□ 0.85
SSBP3-203ENST00000371319 WASF1Q92558 559 aa20.37■□□□□ 0.85
SSBP3-203ENST00000371319 DEXIO95424 95 aa20.36■□□□□ 0.85
SSBP3-203ENST00000371319 ZSCAN23Q3MJ62 389 aa20.36■□□□□ 0.85
SSBP3-203ENST00000371319 RSBN1LQ6PCB5 846 aaPredicted RBP20.36■□□□□ 0.85
SSBP3-203ENST00000371319 TMTC3Q6ZXV5 915 aa20.36■□□□□ 0.85
SSBP3-203ENST00000371319 SPATA32Q96LK8 384 aa20.36■□□□□ 0.85
SSBP3-203ENST00000371319 IDI2Q9BXS1 227 aa20.36■□□□□ 0.85
SSBP3-203ENST00000371319 KAT14Q9H8E8 782 aa20.36■□□□□ 0.85
SSBP3-203ENST00000371319 PSMD14O00487 310 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 VIL1P09327 827 aaKnown RBP20.35■□□□□ 0.85
SSBP3-203ENST00000371319 RBM5P52756 815 aaKnown RBP eCLIP20.35■□□□□ 0.85
SSBP3-203ENST00000371319 ATL3Q6DD88 541 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 ZFPM1Q8IX07 1006 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 CCDC82Q8N4S0 544 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 ZNF396Q96N95 335 aaPredicted RBP20.35■□□□□ 0.85
SSBP3-203ENST00000371319 GMLQ99445 158 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 RNF26Q9BY78 433 aaPredicted RBP20.35■□□□□ 0.85
SSBP3-203ENST00000371319 CFAP45Q9UL16 551 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 PLIN4Q96Q06 1357 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 MYO3BQ8WXR4 1341 aa20.35■□□□□ 0.85
SSBP3-203ENST00000371319 PRPF3O43395 683 aaKnown RBP20.34■□□□□ 0.85
SSBP3-203ENST00000371319 RAD17O75943 681 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 PTGER2P43116 358 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 ZNF445P59923 1031 aa20.34■□□□□ 0.85
SSBP3-203ENST00000371319 BRAPQ7Z569 592 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms