RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PPP2R5DQ14738 602 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 CALCRLQ16602 461 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 C10orf67Q8IYJ2 551 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 ZMYND15Q9H091 742 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 BLZF1Q9H2G9 400 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 ZNF75DP51815 510 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 IL13P35225 146 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 C17orf53Q8N3J3 647 aaPredicted RBP24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 WDR66Q8TBY9 1149 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 STAMQ92783 540 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 CTTNBP2NLQ9P2B4 639 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 ZWINTO95229 277 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 GCNT3O95395 438 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 LPIN2Q92539 896 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 GADD45BO75293 160 aaPredicted RBP24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 DPP8Q6V1X1 898 aaPredicted RBP24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 TRIM6Q9C030 488 aaPredicted RBP24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 KBTBD3Q8NAB2 608 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 NOL3O60936 208 aaKnown RBP24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 CIB2O75838 187 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 LACTBP83111 547 aaPredicted RBP24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 KRT40Q6A162 431 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 NELFBQ8WX92 580 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 SLC52A2Q9HAB3 445 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 DNM3Q9UQ16 869 aa24.66■■□□□ 1.54
TM9SF3-201ENST00000371142 GMNNO75496 209 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 POSTNQ15063 836 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 SLC9C1Q4G0N8 1177 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 KLHL7Q8IXQ5 586 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 MLKLQ8NB16 471 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 TGFBRAP1Q8WUH2 860 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 KRT25Q7Z3Z0 450 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 STMN2Q93045 179 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 PFDN4Q9NQP4 134 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 NUP58Q9BVL2 599 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 MAST3O60307 1309 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 JAK2O60674 1132 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 RABEP2Q9H5N1 569 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 HGSO14964 777 aaPredicted RBP24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 FAM47AQ5JRC9 791 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 CABP7Q86V35 215 aa24.65■■□□□ 1.54
TM9SF3-201ENST00000371142 KRBA2Q6ZNG9 492 aa24.64■■□□□ 1.54
TM9SF3-201ENST00000371142 AOX1Q06278 1338 aa24.64■■□□□ 1.54
TM9SF3-201ENST00000371142 CEP104O60308 925 aa24.64■■□□□ 1.54
TM9SF3-201ENST00000371142 MRPL44Q9H9J2 332 aaKnown RBP24.64■■□□□ 1.54
TM9SF3-201ENST00000371142 GPHNQ9NQX3 736 aaPredicted RBP24.64■■□□□ 1.54
TM9SF3-201ENST00000371142 CFBP00751 764 aa24.64■■□□□ 1.53
TM9SF3-201ENST00000371142 FYB2Q5VWT5 728 aa24.64■■□□□ 1.53
TM9SF3-201ENST00000371142 EXOC3O60645 756 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 ITIH3Q06033 890 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 TRMT44Q8IYL2 757 aaKnown RBP24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 VPS52Q8N1B4 723 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 ASIC3Q9UHC3 531 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 KRT19P08727 400 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 GLT8D2Q9H1C3 349 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 VPS54Q9P1Q0 977 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 NFE2L3Q9Y4A8 694 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 SBNO1A3KN83 1393 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 IFT20Q8IY31 132 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 RIOK3O14730 519 aaKnown RBP24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 CEP85LQ5SZL2 805 aa24.63■■□□□ 1.53
TM9SF3-201ENST00000371142 MTX1Q13505 466 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 NSMFQ6X4W1 530 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 ARID4AP29374 1257 aaPredicted RBP24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 CCDC87Q9NVE4 849 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 ZBED4O75132 1171 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 CCDC110Q8TBZ0 833 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 STK32BQ9NY57 414 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 MYO1AQ9UBC5 1043 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 DCUN1D2Q6PH85 259 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 CEP128Q6ZU80 1094 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 LARGE2Q8N3Y3 721 aa24.62■■□□□ 1.53
TM9SF3-201ENST00000371142 PPFIBP2Q8ND30 876 aa24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 LMTK3Q96Q04 1460 aa24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 DKC1O60832 514 aaKnown RBP eCLIP24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 MAGEA1P43355 309 aa24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 GCKRQ14397 625 aa24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 STK10O94804 968 aaKnown RBP24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 IVNS1ABPQ9Y6Y0 642 aa24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 ELF2Q15723 593 aa24.61■■□□□ 1.53
TM9SF3-201ENST00000371142 PNOCQ13519 176 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 CDAN1Q8IWY9 1227 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 SLF1Q9BQI6 1058 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 AZI2Q9H6S1 392 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 KLHL30Q0D2K2 578 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 STK24Q9Y6E0 443 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 TFAP4Q01664 338 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 IBTKQ9P2D0 1353 aaPredicted RBP24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 GOLGA6CA6NDK9 693 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 GOLGA6DP0CG33 693 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 GOLGA6AQ9NYA3 693 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 MKRN1Q9UHC7 482 aaKnown RBP24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 MROH5Q6ZUA9 1318 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 E7EWF7 191 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 BRDTQ58F21 947 aaPredicted RBP24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 TRIM35Q9UPQ4 493 aa24.6■■□□□ 1.53
TM9SF3-201ENST00000371142 PPP2R5CQ13362 524 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 BABAM1Q9NWV8 329 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 H0YIN7 160 aa24.59■■□□□ 1.53
TM9SF3-201ENST00000371142 NDUFAB1O14561 156 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms