RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 VGLL4Q14135 290 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 ZSWIM8A7E2V4 1837 aa12.82□□□□□ -0.36
EXOSC1-203ENST00000370886 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 FAM196BA6NMK8 535 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 HOXD10P28358 340 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 SH3BP5LQ7L8J4 393 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 HELLSQ9NRZ9 838 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 COL6A3P12111 3177 aa12.81□□□□□ -0.36
EXOSC1-203ENST00000370886 HLA-DOAP06340 250 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 CYP2D6P10635 497 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 GJA8P48165 433 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 TDO2P48775 406 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 SNAPC2Q13487 334 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 BMP2KLQ5H9B9 411 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 AMOTL1Q8IY63 956 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 STK11IPQ8N1F8 1099 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 RAET1EQ8TD07 263 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 HOOK2Q96ED9 719 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 DCP1AQ9NPI6 582 aaPredicted RBP12.8□□□□□ -0.36
EXOSC1-203ENST00000370886 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 GJB1P08034 283 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 GNAT2P19087 354 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 CHMLP26374 656 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 GRK4P32298 578 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 MTFR1Q15390 333 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 VPS53Q5VIR6 699 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 ZNF589Q86UQ0 364 aaPredicted RBP12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 ERO1BQ86YB8 467 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 PRO3102Q9H379 93 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 ATP8A2Q9NTI2 1148 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
EXOSC1-203ENST00000370886 GSG1L2A8MUP6 293 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 PATL2C9JE40 543 aaKnown RBP12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 BTBD19C9JJ37 291 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 USP17L12C9JPN9 530 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 USP17L21D6R901 530 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 UBXN2AP68543 259 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 TTC6Q86TZ1 520 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 TRIM47Q96LD4 638 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 NAPBQ9H115 298 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 PI4KBQ9UBF8 816 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 RFX7Q2KHR2 1363 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 LAMA3Q16787 3333 aa12.78□□□□□ -0.36
EXOSC1-203ENST00000370886 FARP2O94887 1054 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 PSMC4P43686 418 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 PLCD1P51178 756 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 EVX2Q03828 476 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 PPIL2Q13356 520 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 CASC1Q6TDU7 716 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 IFNL3Q8IZI9 196 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 ZKSCAN4Q969J2 545 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 DYNLL2Q96FJ2 89 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 RNF208Q9H0X6 261 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 BIN2Q9UBW5 565 aaPredicted RBP12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 CCDC171Q6TFL3 1326 aa12.77□□□□□ -0.37
EXOSC1-203ENST00000370886 SMIM22K7EJ46 135 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 IRF6O14896 467 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 CDC45O75419 566 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 CCL5P13501 91 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 CAPN2P17655 700 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 CTR9Q6PD62 1173 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 C17orf99Q6UX52 265 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 EPB41L4AQ9HCS5 686 aaPredicted RBP12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
EXOSC1-203ENST00000370886 OSBPP22059 807 aa12.75□□□□□ -0.37
EXOSC1-203ENST00000370886 INPP5BP32019 993 aa12.75□□□□□ -0.37
EXOSC1-203ENST00000370886 MAST2Q6P0Q8 1798 aa12.75□□□□□ -0.37
EXOSC1-203ENST00000370886 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms