RNA–Protein interactions for RNA: ENST00000369717.8

TMIGD3-202, Transcript of transmembrane and immunoglobulin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TMIGD3, Length 1,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3-202ENST00000369717 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
TMIGD3-202ENST00000369717 SAP30BPQ9UHR5 308 aaKnown RBP12.04□□□□□ -0.48
TMIGD3-202ENST00000369717 SIPA1L1O43166 1804 aa12.04□□□□□ -0.48
TMIGD3-202ENST00000369717 PHIPQ8WWQ0 1821 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 ERC2O15083 957 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 CYP2C8P10632 490 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 CTGFP29279 349 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 GCLCP48506 637 aaPredicted RBP12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 KIF22Q14807 665 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 STRBPQ96SI9 672 aaKnown RBP12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 PUS7LQ9H0K6 701 aaKnown RBP12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 PNMA3Q9UL41 463 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
TMIGD3-202ENST00000369717 DOCK1Q14185 1865 aa12.02□□□□□ -0.48
TMIGD3-202ENST00000369717 BRCA2P51587 3418 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 MBD4O95243 580 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 HOXD10P28358 340 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 HMGCS2P54868 508 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 FAM110CQ1W6H9 321 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 LRRFIP1Q32MZ4 808 aaKnown RBP12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 CERKLQ49MI3 558 aaPredicted RBP12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 SBK1Q52WX2 424 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 TREML2Q5T2D2 321 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 CCDC84Q86UT8 332 aaPredicted RBP12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 APPBP2Q92624 585 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 ARHGAP39Q9C0H5 1083 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 KIAA1683Q9H0B3 1180 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 ARMT1Q9H993 441 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 MCM9Q9NXL9 1143 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 MORF4L1Q9UBU8 362 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 SRRDQ9UH36 339 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 SWAP70Q9UH65 585 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 CPA4Q9UI42 421 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 CDK5RAP2Q96SN8 1893 aa12.02□□□□□ -0.49
TMIGD3-202ENST00000369717 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 RNF113AO15541 343 aaKnown RBP12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 GH2P01242 217 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 CHGBP05060 677 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 POLR3DP05423 398 aaPredicted RBP12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 MX1P20591 662 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 PSMC4P43686 418 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 SLFNL1Q499Z3 407 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 GADL1Q6ZQY3 521 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 SDR42E1Q8WUS8 393 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 OSBP2Q969R2 916 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 CCDC17Q96LX7 622 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 ASCC2Q9H1I8 757 aaPredicted RBP12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 TNRC18O15417 2968 aaPredicted RBP12.01□□□□□ -0.49
TMIGD3-202ENST00000369717 DDX60LQ5H9U9 1706 aaKnown RBP12□□□□□ -0.49
TMIGD3-202ENST00000369717 GSG1L2A8MUP6 293 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 PRKAB2O43741 272 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 GNAT2P19087 354 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 USP14P54578 494 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
TMIGD3-202ENST00000369717 IRF5Q13568 498 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 MTMR2Q13614 643 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 ABCB5Q2M3G0 1257 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
TMIGD3-202ENST00000369717 CTR9Q6PD62 1173 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 USP17L2Q6R6M4 530 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 LBX2Q6XYB7 198 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 C16orf86Q6ZW13 317 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 NBPF11Q86T75 865 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
TMIGD3-202ENST00000369717 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
TMIGD3-202ENST00000369717 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
TMIGD3-202ENST00000369717 RWDD1Q9H446 243 aaPredicted RBP12□□□□□ -0.49
TMIGD3-202ENST00000369717 PTCH2Q9Y6C5 1203 aa12□□□□□ -0.49
TMIGD3-202ENST00000369717 PTPRFP10586 1907 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 USP17L12C9JPN9 530 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 USP17L21D6R901 530 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 GDF11O95390 407 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 CAPN2P17655 700 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 OSBPP22059 807 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 PDE1AP54750 535 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 FCGRTP55899 365 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 ANKRD45Q5TZF3 282 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 TMEM179Q6ZVK1 233 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 SIAH1Q8IUQ4 282 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 OSBPL3Q9H4L5 887 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 TMOD4Q9NZQ9 345 aa11.99□□□□□ -0.49
TMIGD3-202ENST00000369717 KIAA0100Q14667 2235 aaKnown RBP11.98□□□□□ -0.49
TMIGD3-202ENST00000369717 LOC285556D6RIA3 1793 aa11.98□□□□□ -0.49
TMIGD3-202ENST00000369717 EVX2Q03828 476 aa11.98□□□□□ -0.49
TMIGD3-202ENST00000369717 ZMYM1Q5SVZ6 1142 aa11.98□□□□□ -0.49
TMIGD3-202ENST00000369717 TSHZ3Q63HK5 1081 aa11.98□□□□□ -0.49
TMIGD3-202ENST00000369717 POTEEQ6S8J3 1075 aa11.98□□□□□ -0.49
TMIGD3-202ENST00000369717 PXYLP1Q8TE99 480 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms