RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 EVX2Q03828 476 aa24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 SPP2Q13103 211 aa24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 ZSCAN25Q6NSZ9 544 aa24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 FBXO46Q6PJ61 603 aaPredicted RBP24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 CRACR2BQ8N4Y2 399 aaPredicted RBP24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 STAP2Q9UGK3 403 aa24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 HPS5Q9UPZ3 1129 aa24.8■■□□□ 1.56
SMNDC1-201ENST00000369592 ZSWIM8A7E2V4 1837 aa24.79■■□□□ 1.56
SMNDC1-201ENST00000369592 SHMT1P34896 483 aa24.79■■□□□ 1.56
SMNDC1-201ENST00000369592 SLC4A8Q2Y0W8 1093 aa24.79■■□□□ 1.56
SMNDC1-201ENST00000369592 ZBTB21Q9ULJ3 1066 aa24.79■■□□□ 1.56
SMNDC1-201ENST00000369592 GLRX3O76003 335 aaKnown RBP24.78■■□□□ 1.56
SMNDC1-201ENST00000369592 MX1P20591 662 aa24.78■■□□□ 1.56
SMNDC1-201ENST00000369592 ANKRD45Q5TZF3 282 aa24.78■■□□□ 1.56
SMNDC1-201ENST00000369592 PROCA1Q8NCQ7 364 aaPredicted RBP24.78■■□□□ 1.56
SMNDC1-201ENST00000369592 ATP8A2Q9NTI2 1148 aa24.78■■□□□ 1.56
SMNDC1-201ENST00000369592 AGTPBP1Q9UPW5 1226 aa24.78■■□□□ 1.56
SMNDC1-201ENST00000369592 ERC2O15083 957 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 GDF11O95390 407 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 IGHDP01880 384 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 BCRP11274 1271 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 OSBP2Q969R2 916 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 STRBPQ96SI9 672 aaKnown RBP24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 MCM9Q9NXL9 1143 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 TAOK2Q9UL54 1235 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 TRIM17Q9Y577 477 aa24.77■■□□□ 1.56
SMNDC1-201ENST00000369592 RNF113AO15541 343 aaKnown RBP24.76■■□□□ 1.55
SMNDC1-201ENST00000369592 TREML2Q5T2D2 321 aa24.76■■□□□ 1.55
SMNDC1-201ENST00000369592 PARK7Q99497 189 aaKnown RBP24.76■■□□□ 1.55
SMNDC1-201ENST00000369592 TRIM34Q9BYJ4 488 aa24.76■■□□□ 1.55
SMNDC1-201ENST00000369592 CYP2C8P10632 490 aa24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 CYP2D6P10635 497 aa24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 LACTBP83111 547 aaPredicted RBP24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 GADL1Q6ZQY3 521 aa24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 APPBP2Q92624 585 aa24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 RWDD1Q9H446 243 aaPredicted RBP24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 EFCC1Q9HA90 598 aa24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 AS3MTQ9HBK9 375 aa24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 CPA4Q9UI42 421 aa24.75■■□□□ 1.55
SMNDC1-201ENST00000369592 GH2P01242 217 aa24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 POLR3DP05423 398 aaPredicted RBP24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 ZFYP08048 801 aaPredicted RBP24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 CTGFP29279 349 aa24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 HMGCS2P54868 508 aa24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 BACE1P56817 501 aa24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 ARHGAP39Q9C0H5 1083 aa24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 PTPN22Q9Y2R2 807 aa24.74■■□□□ 1.55
SMNDC1-201ENST00000369592 MGAMO43451 1857 aa24.73■■□□□ 1.55
SMNDC1-201ENST00000369592 SMIM22K7EJ46 135 aa24.73■■□□□ 1.55
SMNDC1-201ENST00000369592 GUCY1A2P33402 732 aa24.73■■□□□ 1.55
SMNDC1-201ENST00000369592 PDE1AP54750 535 aa24.73■■□□□ 1.55
SMNDC1-201ENST00000369592 CERKLQ49MI3 558 aaPredicted RBP24.73■■□□□ 1.55
SMNDC1-201ENST00000369592 C12orf60Q5U649 245 aa24.73■■□□□ 1.55
SMNDC1-201ENST00000369592 MYH8P13535 1937 aa24.73■■□□□ 1.55
SMNDC1-201ENST00000369592 C19orf81C9J6K1 198 aa24.72■■□□□ 1.55
SMNDC1-201ENST00000369592 SLC4A4Q9Y6R1 1079 aa24.72■■□□□ 1.55
SMNDC1-201ENST00000369592 GSG1L2A8MUP6 293 aa24.71■■□□□ 1.55
SMNDC1-201ENST00000369592 MTMR2Q13614 643 aa24.71■■□□□ 1.55
SMNDC1-201ENST00000369592 DOCK3Q8IZD9 2030 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 USP17L10C9JJH3 530 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 USP17L12C9JPN9 530 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 USP17L21D6R901 530 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 HOXA7P31268 230 aaPredicted RBP24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 NUCB1Q02818 461 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 ABCB5Q2M3G0 1257 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 GIMAP6Q6P9H5 292 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 CTR9Q6PD62 1173 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 SLC44A5Q8NCS7 719 aa24.7■■□□□ 1.54
SMNDC1-201ENST00000369592 CYP2D7A0A087X1C5 515 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 M0R2C6 588 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 GNRH1P01148 92 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 SBK1Q52WX2 424 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 ZMYM1Q5SVZ6 1142 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 DYNLL2Q96FJ2 89 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 C12orf42Q96LP6 360 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 EMILIN3Q9NT22 766 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 SWAP70Q9UH65 585 aa24.69■■□□□ 1.54
SMNDC1-201ENST00000369592 ARHGEF6Q15052 776 aa24.68■■□□□ 1.54
SMNDC1-201ENST00000369592 TRIM47Q96LD4 638 aa24.68■■□□□ 1.54
SMNDC1-201ENST00000369592 LNPKQ9C0E8 428 aa24.68■■□□□ 1.54
SMNDC1-201ENST00000369592 CENPFP49454 3210 aa24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 GPAA1O43292 621 aa24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 LRRFIP1Q32MZ4 808 aaKnown RBP24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 C16orf86Q6ZW13 317 aa24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 CHD1LQ86WJ1 897 aa24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 ARMC5Q96C12 935 aa24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 SEC62Q99442 399 aaKnown RBP24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 ASCC2Q9H1I8 757 aaPredicted RBP24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 EPB41L4AQ9HCS5 686 aaPredicted RBP24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 ZBTB47Q9UFB7 747 aaPredicted RBP24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 PNMA3Q9UL41 463 aa24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 GREB1LQ9C091 1923 aaPredicted RBP24.67■■□□□ 1.54
SMNDC1-201ENST00000369592 KIAA0100Q14667 2235 aaKnown RBP24.66■■□□□ 1.54
SMNDC1-201ENST00000369592 CDK8P49336 464 aa24.66■■□□□ 1.54
SMNDC1-201ENST00000369592 TICAM2Q86XR7 235 aa24.66■■□□□ 1.54
SMNDC1-201ENST00000369592 ACER1Q8TDN7 264 aa24.66■■□□□ 1.54
SMNDC1-201ENST00000369592 KIAA1683Q9H0B3 1180 aa24.66■■□□□ 1.54
SMNDC1-201ENST00000369592 OSBPL3Q9H4L5 887 aa24.66■■□□□ 1.54
SMNDC1-201ENST00000369592 PSMC4P43686 418 aa24.65■■□□□ 1.54
SMNDC1-201ENST00000369592 PABPC4Q13310 644 aaKnown RBP eCLIP24.65■■□□□ 1.545e-7■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms