RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 FERMT3Q86UX7 667 aa19.63■□□□□ 0.73
PHGDH-202ENST00000369409 NUP133Q8WUM0 1156 aa19.63■□□□□ 0.73
PHGDH-202ENST00000369409 FAM217BQ9NTX9 383 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-202ENST00000369409 CDKL5O76039 1030 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 RASA1P20936 1047 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 CDK8P49336 464 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 NT5C2P49902 561 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 RCAN1P53805 252 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 RTN1Q16799 776 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 CPLX2Q6PUV4 134 aaKnown RBP19.62■□□□□ 0.73
PHGDH-202ENST00000369409 ZNF287Q9HBT7 754 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 ORC3Q9UBD5 711 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-202ENST00000369409 PTMSP20962 102 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 ZNF444Q8N0Y2 327 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-202ENST00000369409 SPON1Q9HCB6 807 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 ZBTB12Q9Y330 459 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-202ENST00000369409 ATP6V1DQ9Y5K8 247 aa19.62■□□□□ 0.73
PHGDH-202ENST00000369409 TSPY3P0CV98 308 aa19.61■□□□□ 0.73
PHGDH-202ENST00000369409 TSPY8P0CW00 308 aa19.61■□□□□ 0.73
PHGDH-202ENST00000369409 RASSF7Q02833 373 aa19.61■□□□□ 0.73
PHGDH-202ENST00000369409 NTRK3Q16288 839 aa19.61■□□□□ 0.73
PHGDH-202ENST00000369409 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
PHGDH-202ENST00000369409 PHKBQ93100 1093 aa19.61■□□□□ 0.73
PHGDH-202ENST00000369409 GMLQ99445 158 aa19.61■□□□□ 0.73
PHGDH-202ENST00000369409 CATIPQ7Z7H3 387 aa19.6■□□□□ 0.73
PHGDH-202ENST00000369409 JDP2Q8WYK2 163 aa19.6■□□□□ 0.73
PHGDH-202ENST00000369409 TRAK2O60296 914 aa19.6■□□□□ 0.73
PHGDH-202ENST00000369409 CXCL9Q07325 125 aa19.6■□□□□ 0.73
PHGDH-202ENST00000369409 RCSD1Q6JBY9 416 aa19.6■□□□□ 0.73
PHGDH-202ENST00000369409 IL17RBQ9NRM6 502 aa19.6■□□□□ 0.73
PHGDH-202ENST00000369409 LTBP3Q9NS15 1303 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 GUCY1B3Q02153 619 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 TCP10Q12799 353 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 FANCBQ8NB91 859 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 IDI2Q9BXS1 227 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 TDRD3Q9H7E2 651 aaKnown RBP19.59■□□□□ 0.73
PHGDH-202ENST00000369409 LMBRD1Q9NUN5 540 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 FAM198AQ9UFP1 575 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 HDAC9Q9UKV0 1011 aa19.59■□□□□ 0.73
PHGDH-202ENST00000369409 DDAH1O94760 285 aa19.58■□□□□ 0.73
PHGDH-202ENST00000369409 HLA-DOAP06340 250 aa19.58■□□□□ 0.73
PHGDH-202ENST00000369409 GABPAQ06546 454 aa19.58■□□□□ 0.73
PHGDH-202ENST00000369409 ZFPM1Q8IX07 1006 aa19.58■□□□□ 0.73
PHGDH-202ENST00000369409 PRMT6Q96LA8 375 aaPredicted RBP19.58■□□□□ 0.73
PHGDH-202ENST00000369409 SERPINB13Q9UIV8 391 aa19.58■□□□□ 0.73
PHGDH-202ENST00000369409 CNPY2Q9Y2B0 182 aa19.58■□□□□ 0.73
PHGDH-202ENST00000369409 GREB1LQ9C091 1923 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-202ENST00000369409 CCDC196A0A1B0GTZ2 297 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 PRPF40AO75400 957 aaKnown RBP19.58■□□□□ 0.72
PHGDH-202ENST00000369409 IFNAR1P17181 557 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 TROAPQ12815 778 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 CIAPIN1Q6FI81 312 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 OGFOD1Q8N543 542 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 C8orf76Q96K31 380 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 SLC26A6Q9BXS9 759 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 GDPD2Q9HCC8 539 aa19.58■□□□□ 0.72
PHGDH-202ENST00000369409 STK36Q9NRP7 1315 aa19.57■□□□□ 0.72
PHGDH-202ENST00000369409 CALM1P0DP23 149 aa19.57■□□□□ 0.72
PHGDH-202ENST00000369409 CALM2P0DP24 149 aa19.57■□□□□ 0.72
PHGDH-202ENST00000369409 CALM3P0DP25 149 aa19.57■□□□□ 0.72
PHGDH-202ENST00000369409 NCLP19338 710 aaKnown RBP19.57■□□□□ 0.72
PHGDH-202ENST00000369409 DNM1Q05193 864 aaKnown RBP19.57■□□□□ 0.72
PHGDH-202ENST00000369409 RESTQ13127 1097 aa19.57■□□□□ 0.72
PHGDH-202ENST00000369409 CMTR1Q8N1G2 835 aaKnown RBP19.57■□□□□ 0.72
PHGDH-202ENST00000369409 AGBL3Q8NEM8 1001 aa19.57■□□□□ 0.72
PHGDH-202ENST00000369409 TCP11L1Q9NUJ3 509 aa19.57■□□□□ 0.72
PHGDH-202ENST00000369409 DICER1Q9UPY3 1922 aaKnown RBP19.56■□□□□ 0.72
PHGDH-202ENST00000369409 SPDYE2BA6NHP3 402 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 SPDYE6P0CI01 402 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 SSRP1Q08945 709 aaKnown RBP19.56■□□□□ 0.72
PHGDH-202ENST00000369409 CCDC178Q5BJE1 867 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 FAM173BQ6P4H8 233 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 DGKHQ86XP1 1220 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 AIFM3Q96NN9 605 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 KAT14Q9H8E8 782 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 PLIN4Q96Q06 1357 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 FMNL1O95466 1100 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-202ENST00000369409 PPP2R5BQ15173 497 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 DLGAP5Q15398 846 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 OTUD7BQ6GQQ9 843 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 NEDD1Q8NHV4 660 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 ALG1Q9BT22 464 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 SWAP70Q9UH65 585 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 STX8Q9UNK0 236 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 MYH4Q9Y623 1939 aa19.56■□□□□ 0.72
PHGDH-202ENST00000369409 DDTLA6NHG4 134 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-202ENST00000369409 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
PHGDH-202ENST00000369409 FIBPO43427 364 aa19.55■□□□□ 0.72
PHGDH-202ENST00000369409 NPM3O75607 178 aaKnown RBP19.55■□□□□ 0.72
PHGDH-202ENST00000369409 PRELPP51888 382 aa19.55■□□□□ 0.72
PHGDH-202ENST00000369409 ZSCAN29Q8IWY8 852 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-202ENST00000369409 CCDC82Q8N4S0 544 aa19.55■□□□□ 0.72
PHGDH-202ENST00000369409 EHD4Q9H223 541 aa19.55■□□□□ 0.72
PHGDH-202ENST00000369409 GJB4Q9NTQ9 266 aa19.55■□□□□ 0.72
PHGDH-202ENST00000369409 RBM28Q9NW13 759 aaKnown RBP19.55■□□□□ 0.72
PHGDH-202ENST00000369409 TAOK2Q9UL54 1235 aa19.55■□□□□ 0.72
PHGDH-202ENST00000369409 SKOR2Q2VWA4 1001 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-202ENST00000369409 SH3BP5LQ7L8J4 393 aa19.54■□□□□ 0.72
PHGDH-202ENST00000369409 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
PHGDH-202ENST00000369409 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms