RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 PPP2R5EQ16537 467 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 MUM1Q2TAK8 710 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 PEX26Q7Z412 305 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.5
RPRD2-202ENST00000369068 CEP120Q8N960 986 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 NELFBQ8WX92 580 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 STK38LQ9Y2H1 464 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 CHL1O00533 1208 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 DTNBO60941 627 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 APPBP2Q92624 585 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 PALD1Q9ULE6 856 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 SEC31AO94979 1220 aaKnown RBP11.9□□□□□ -0.5
RPRD2-202ENST00000369068 GUCY2FP51841 1108 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
RPRD2-202ENST00000369068 FANCAO15360 1455 aa11.9□□□□□ -0.51
RPRD2-202ENST00000369068 LETM2Q2VYF4 491 aa11.9□□□□□ -0.51
RPRD2-202ENST00000369068 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.51
RPRD2-202ENST00000369068 FANCLQ9NW38 375 aa11.9□□□□□ -0.51
RPRD2-202ENST00000369068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.51
RPRD2-202ENST00000369068 FAM169AQ9Y6X4 670 aa11.9□□□□□ -0.51
RPRD2-202ENST00000369068 CLTAP09496 248 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 STX2P32856 288 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 HSPA1LP34931 641 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
RPRD2-202ENST00000369068 CLCN6P51797 869 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 UAP1Q16222 522 aaPredicted RBP11.89□□□□□ -0.51
RPRD2-202ENST00000369068 MAGEB6Q8N7X4 407 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 CHAMP1Q96JM3 812 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 NAP1L4Q99733 375 aaKnown RBP11.89□□□□□ -0.51
RPRD2-202ENST00000369068 MYO1AQ9UBC5 1043 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 FRMD4BQ9Y2L6 1034 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 FAN1Q9Y2M0 1017 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 USH1CQ9Y6N9 552 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 PPARDQ03181 441 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 STAG1Q8WVM7 1258 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 ODF2LQ9ULJ1 636 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
RPRD2-202ENST00000369068 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
RPRD2-202ENST00000369068 SERTAD1Q9UHV2 236 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 FLT4P35916 1363 aa11.89□□□□□ -0.51
RPRD2-202ENST00000369068 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 SFMBT2Q5VUG0 894 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 NBPF6Q5VWK0 638 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 PIK3AP1Q6ZUJ8 805 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 MSANTD4Q8NCY6 345 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 NBPF4Q96M43 638 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 HOXB7P09629 217 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 KRT15P19012 456 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 DNM2P50570 870 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 CUL4AQ13619 759 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 CCDC14Q49A88 953 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 SEPT14Q6ZU15 432 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 C2CD5Q86YS7 1000 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
RPRD2-202ENST00000369068 CFAP43Q8NDM7 1665 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 MAP3K5Q99683 1374 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 ABCC4O15439 1325 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 A0A1W2PQ27 194 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 A0A1W2PQ64 194 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 A0A1W2PQD8 194 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 TXNDC9O14530 226 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 SF3A3Q12874 501 aaKnown RBP eCLIP11.88□□□□□ -0.51
RPRD2-202ENST00000369068 TRIM68Q6AZZ1 485 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 CCDC105Q8IYK2 499 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 KIFAP3Q92845 792 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
RPRD2-202ENST00000369068 MYO1CO00159 1063 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 PNMA6AP0CW24 399 aaPredicted RBP11.88□□□□□ -0.51
RPRD2-202ENST00000369068 TIMM10P62072 90 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 FBXO38Q6PIJ6 1188 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 RRAGAQ7L523 313 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.88□□□□□ -0.51
RPRD2-202ENST00000369068 TPCN1Q9ULQ1 816 aa11.88□□□□□ -0.51
RPRD2-202ENST00000369068 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 C6orf229H3BNL8 230 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 NDC80O14777 642 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 MBD4O95243 580 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 TROVE2P10155 538 aaKnown RBP eCLIP11.87□□□□□ -0.51
RPRD2-202ENST00000369068 IFT88Q13099 833 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 ICE2Q659A1 982 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 CERS3Q8IU89 383 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 CTTNBP2NLQ9P2B4 639 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 EYA2O00167 538 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 GBP7Q8N8V2 638 aaPredicted RBP11.87□□□□□ -0.51
RPRD2-202ENST00000369068 RPGRQ92834 1020 aaKnown RBP11.87□□□□□ -0.51
RPRD2-202ENST00000369068 NUF2Q9BZD4 464 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 FAM207AQ9NSI2 230 aaPredicted RBP11.87□□□□□ -0.51
RPRD2-202ENST00000369068 MCM9Q9NXL9 1143 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 IRX4P78413 519 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 SPATA1Q5VX52 437 aa11.87□□□□□ -0.51
RPRD2-202ENST00000369068 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms