RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PUS7LQ9H0K6 701 aaKnown RBP22.88■■□□□ 1.25
CKS1B-203ENST00000368439 GINM1Q9NU53 330 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 ZBTB21Q9ULJ3 1066 aa22.88■■□□□ 1.25
CKS1B-203ENST00000368439 CYP2C8P10632 490 aa22.87■■□□□ 1.25
CKS1B-203ENST00000368439 SH3D19Q5HYK7 790 aa22.87■■□□□ 1.25
CKS1B-203ENST00000368439 ANKRD45Q5TZF3 282 aa22.87■■□□□ 1.25
CKS1B-203ENST00000368439 MCM9Q9NXL9 1143 aa22.87■■□□□ 1.25
CKS1B-203ENST00000368439 MX1P20591 662 aa22.86■■□□□ 1.25
CKS1B-203ENST00000368439 SHMT1P34896 483 aa22.86■■□□□ 1.25
CKS1B-203ENST00000368439 TREML2Q5T2D2 321 aa22.86■■□□□ 1.25
CKS1B-203ENST00000368439 PROCA1Q8NCQ7 364 aaPredicted RBP22.86■■□□□ 1.25
CKS1B-203ENST00000368439 PARK7Q99497 189 aaKnown RBP22.86■■□□□ 1.25
CKS1B-203ENST00000368439 EFCC1Q9HA90 598 aa22.86■■□□□ 1.25
CKS1B-203ENST00000368439 AS3MTQ9HBK9 375 aa22.86■■□□□ 1.25
CKS1B-203ENST00000368439 CPA4Q9UI42 421 aa22.86■■□□□ 1.25
CKS1B-203ENST00000368439 AGTPBP1Q9UPW5 1226 aa22.86■■□□□ 1.25
CKS1B-203ENST00000368439 MYH8P13535 1937 aa22.85■■□□□ 1.25
CKS1B-203ENST00000368439 GLRX3O76003 335 aaKnown RBP22.85■■□□□ 1.25
CKS1B-203ENST00000368439 POLR3DP05423 398 aaPredicted RBP22.85■■□□□ 1.25
CKS1B-203ENST00000368439 CYP2D6P10635 497 aa22.85■■□□□ 1.25
CKS1B-203ENST00000368439 BCRP11274 1271 aa22.85■■□□□ 1.25
CKS1B-203ENST00000368439 LACTBP83111 547 aaPredicted RBP22.85■■□□□ 1.25
CKS1B-203ENST00000368439 ARHGAP39Q9C0H5 1083 aa22.85■■□□□ 1.25
CKS1B-203ENST00000368439 ATP8A2Q9NTI2 1148 aa22.85■■□□□ 1.25
CKS1B-203ENST00000368439 PTPN22Q9Y2R2 807 aa22.85■■□□□ 1.25
CKS1B-203ENST00000368439 MGAMO43451 1857 aa22.84■■□□□ 1.25
CKS1B-203ENST00000368439 ERC2O15083 957 aa22.84■■□□□ 1.25
CKS1B-203ENST00000368439 IGHDP01880 384 aa22.84■■□□□ 1.25
CKS1B-203ENST00000368439 CTGFP29279 349 aa22.84■■□□□ 1.25
CKS1B-203ENST00000368439 HMGCS2P54868 508 aa22.84■■□□□ 1.25
CKS1B-203ENST00000368439 SMC5Q8IY18 1101 aa22.84■■□□□ 1.25
CKS1B-203ENST00000368439 RNF113AO15541 343 aaKnown RBP22.83■■□□□ 1.25
CKS1B-203ENST00000368439 GH2P01242 217 aa22.83■■□□□ 1.25
CKS1B-203ENST00000368439 BACE1P56817 501 aa22.83■■□□□ 1.25
CKS1B-203ENST00000368439 OSBP2Q969R2 916 aa22.83■■□□□ 1.25
CKS1B-203ENST00000368439 STRBPQ96SI9 672 aaKnown RBP22.83■■□□□ 1.25
CKS1B-203ENST00000368439 STAP2Q9UGK3 403 aa22.83■■□□□ 1.25
CKS1B-203ENST00000368439 SMIM22K7EJ46 135 aa22.82■■□□□ 1.24
CKS1B-203ENST00000368439 MTMR2Q13614 643 aa22.82■■□□□ 1.24
CKS1B-203ENST00000368439 CERKLQ49MI3 558 aaPredicted RBP22.82■■□□□ 1.24
CKS1B-203ENST00000368439 APPBP2Q92624 585 aa22.82■■□□□ 1.24
CKS1B-203ENST00000368439 RWDD1Q9H446 243 aaPredicted RBP22.82■■□□□ 1.24
CKS1B-203ENST00000368439 SLC4A4Q9Y6R1 1079 aa22.82■■□□□ 1.24
CKS1B-203ENST00000368439 CENPFP49454 3210 aa22.82■■□□□ 1.24
CKS1B-203ENST00000368439 ZFYP08048 801 aaPredicted RBP22.81■■□□□ 1.24
CKS1B-203ENST00000368439 GUCY1A2P33402 732 aa22.81■■□□□ 1.24
CKS1B-203ENST00000368439 RGS19P49795 217 aa22.81■■□□□ 1.24
CKS1B-203ENST00000368439 C19orf81C9J6K1 198 aa22.8■■□□□ 1.24
CKS1B-203ENST00000368439 USP17L10C9JJH3 530 aa22.8■■□□□ 1.24
CKS1B-203ENST00000368439 ABCB5Q2M3G0 1257 aa22.8■■□□□ 1.24
CKS1B-203ENST00000368439 C12orf60Q5U649 245 aa22.8■■□□□ 1.24
CKS1B-203ENST00000368439 DYNLL2Q96FJ2 89 aa22.8■■□□□ 1.24
CKS1B-203ENST00000368439 TAOK2Q9UL54 1235 aa22.8■■□□□ 1.24
CKS1B-203ENST00000368439 CYP2D7A0A087X1C5 515 aa22.79■■□□□ 1.24
CKS1B-203ENST00000368439 USP17L12C9JPN9 530 aa22.79■■□□□ 1.24
CKS1B-203ENST00000368439 USP17L21D6R901 530 aa22.79■■□□□ 1.24
CKS1B-203ENST00000368439 PDE1AP54750 535 aa22.79■■□□□ 1.24
CKS1B-203ENST00000368439 ARHGEF6Q15052 776 aa22.79■■□□□ 1.24
CKS1B-203ENST00000368439 SLC44A5Q8NCS7 719 aa22.79■■□□□ 1.24
CKS1B-203ENST00000368439 GSG1L2A8MUP6 293 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 M0R2C6 588 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 KIF22Q14807 665 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 CTR9Q6PD62 1173 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 TRIM47Q96LD4 638 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 LNPKQ9C0E8 428 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 EMILIN3Q9NT22 766 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
CKS1B-203ENST00000368439 SWAP70Q9UH65 585 aa22.78■■□□□ 1.24
CKS1B-203ENST00000368439 GPAA1O43292 621 aa22.77■■□□□ 1.24
CKS1B-203ENST00000368439 GNRH1P01148 92 aa22.77■■□□□ 1.24
CKS1B-203ENST00000368439 HOXA7P31268 230 aaPredicted RBP22.77■■□□□ 1.24
CKS1B-203ENST00000368439 PSMC4P43686 418 aa22.77■■□□□ 1.24
CKS1B-203ENST00000368439 ASCC2Q9H1I8 757 aaPredicted RBP22.77■■□□□ 1.24
CKS1B-203ENST00000368439 PNMA3Q9UL41 463 aa22.77■■□□□ 1.24
CKS1B-203ENST00000368439 PTCH2Q9Y6C5 1203 aa22.77■■□□□ 1.24
CKS1B-203ENST00000368439 PABPC4Q13310 644 aaKnown RBP eCLIP22.76■■□□□ 1.233e-23■□□□□ 9
CKS1B-203ENST00000368439 RAB3GAP1Q15042 981 aa22.76■■□□□ 1.23
CKS1B-203ENST00000368439 ACER1Q8TDN7 264 aa22.76■■□□□ 1.23
CKS1B-203ENST00000368439 SMCR8Q8TEV9 937 aaPredicted RBP22.76■■□□□ 1.23
CKS1B-203ENST00000368439 C12orf42Q96LP6 360 aa22.76■■□□□ 1.23
CKS1B-203ENST00000368439 SEC62Q99442 399 aaKnown RBP22.76■■□□□ 1.23
CKS1B-203ENST00000368439 FSD1Q9BTV5 496 aa22.76■■□□□ 1.23
CKS1B-203ENST00000368439 CABP5Q9NP86 173 aa22.76■■□□□ 1.23
CKS1B-203ENST00000368439 TMOD4Q9NZQ9 345 aa22.76■■□□□ 1.23
CKS1B-203ENST00000368439 DOCK3Q8IZD9 2030 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 ECM2O94769 699 aaPredicted RBP22.75■■□□□ 1.23
CKS1B-203ENST00000368439 SOX10P56693 466 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 NUCB1Q02818 461 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 SEPT2Q15019 361 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 LRRFIP1Q32MZ4 808 aaKnown RBP22.75■■□□□ 1.23
CKS1B-203ENST00000368439 SBK1Q52WX2 424 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 ZMYM1Q5SVZ6 1142 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 B4GALNT3Q6L9W6 998 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 GIMAP6Q6P9H5 292 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 USP17L2Q6R6M4 530 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 C16orf86Q6ZW13 317 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 ARMC5Q96C12 935 aa22.75■■□□□ 1.23
CKS1B-203ENST00000368439 EPB41L4AQ9HCS5 686 aaPredicted RBP22.75■■□□□ 1.23
CKS1B-203ENST00000368439 RBBP6Q7Z6E9 1792 aaKnown RBP22.74■■□□□ 1.23
CKS1B-203ENST00000368439 OSBPP22059 807 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms