RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CCDC65Q8IXS2 484 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 NLGN1Q8N2Q7 840 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 CFBP00751 764 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 ADD2P35612 726 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 BAG6P46379 1132 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 FANCCQ00597 558 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 TRMT44Q8IYL2 757 aaKnown RBP13.86□□□□□ -0.19
PTPRK-203ENST00000368207 LRRC47Q8N1G4 583 aaKnown RBP13.86□□□□□ -0.19
PTPRK-203ENST00000368207 ZMYM6O95789 1325 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 SMCO2A6NFE2 343 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 DCAF17Q5H9S7 520 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-203ENST00000368207 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 C17orf53Q8N3J3 647 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-203ENST00000368207 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-203ENST00000368207 TBC1D8BQ0IIM8 1120 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 KIF5AQ12840 1032 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 POSTNQ15063 836 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 SYT10Q6XYQ8 523 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 SUPT20HQ8NEM7 779 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 NAA15Q9BXJ9 866 aaKnown RBP13.85□□□□□ -0.19
PTPRK-203ENST00000368207 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 HOMER2Q9NSB8 354 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 BIN2Q9UBW5 565 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-203ENST00000368207 MRVI1Q9Y6F6 885 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 DIP2CQ9Y2E4 1556 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 USP31Q70CQ4 1352 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 PFKFB1P16118 471 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 ADALQ6DHV7 355 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 FBXO18Q8NFZ0 1043 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 GPT2Q8TD30 523 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
PTPRK-203ENST00000368207 BLZF1Q9H2G9 400 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 PICK1Q9NRD5 415 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 SERTAD1Q9UHV2 236 aa13.85□□□□□ -0.19
PTPRK-203ENST00000368207 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
PTPRK-203ENST00000368207 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 NEBLO76041 1014 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 IFFO1Q0D2I5 559 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 NCAPH2Q6IBW4 605 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 LARGE1O95461 756 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 CCDC172P0C7W6 258 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 CTNNA2P26232 953 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 PNOCQ13519 176 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 APOA5Q6Q788 366 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 NSMFQ6X4W1 530 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 LCORLQ8N3X6 602 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 IGSF22Q8N9C0 903 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 LZTS2Q9BRK4 669 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 XDHP47989 1333 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 SETBP1Q9Y6X0 1596 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 MCM3P25205 808 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 USP37Q86T82 979 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 CSGALNACT2Q8N6G5 542 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 NLRP12P59046 1061 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 RASGRF1Q13972 1273 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 MLKLQ8NB16 471 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 FERMT2Q96AC1 680 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 NAP1L4Q99733 375 aaKnown RBP13.84□□□□□ -0.19
PTPRK-203ENST00000368207 BAG1Q99933 345 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-203ENST00000368207 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
PTPRK-203ENST00000368207 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
PTPRK-203ENST00000368207 DDX39AO00148 427 aaKnown RBP13.83□□□□□ -0.19
PTPRK-203ENST00000368207 ZNF75DP51815 510 aa13.83□□□□□ -0.19
PTPRK-203ENST00000368207 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.19
PTPRK-203ENST00000368207 ZBTB9Q96C00 473 aa13.83□□□□□ -0.19
PTPRK-203ENST00000368207 BCCIPQ9P287 314 aaKnown RBP eCLIP13.83□□□□□ -0.19
PTPRK-203ENST00000368207 PTPRMP28827 1452 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 AKR1B15C9JRZ8 316 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-203ENST00000368207 TACC1O75410 805 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CALCRLQ16602 461 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 GPIHBP1Q8IV16 184 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 PIH1D3Q9NQM4 214 aaKnown RBP13.83□□□□□ -0.2
PTPRK-203ENST00000368207 SYNRGQ9UMZ2 1314 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 MED23Q9ULK4 1368 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CTAGE15A4D2H0 777 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 KRT86O43790 486 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 KIAA0754O94854 1291 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CTAGE8P0CG41 777 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 MYCLP12524 364 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CTAGE6Q86UF2 777 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CTAGE4Q8IX94 777 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 KRT83P78385 493 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 INF2Q27J81 1249 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 HERC4Q5GLZ8 1057 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-203ENST00000368207 ZNF569Q5MCW4 686 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 MAEAQ7L5Y9 396 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 TBC1D7Q9P0N9 293 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 PCDHA7Q9UN72 937 aa13.83□□□□□ -0.2
PTPRK-203ENST00000368207 CYP2D7A0A087X1C5 515 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 MTX1Q13505 466 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms