RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 CAPN6Q9Y6Q1 641 aa7.7□□□□□ -1.18
PTPRK-202ENST00000368205 GDNFP39905 211 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 NKG7Q16617 165 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 LCE4AQ5TA78 99 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 ZNF746Q6NUN9 644 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-202ENST00000368205 HID1Q8IV36 788 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 LIN37Q96GY3 246 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-202ENST00000368205 COX4I2Q96KJ9 171 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 ATP13A1Q9HD20 1204 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 C19orf73Q9NVV2 129 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 ST14Q9Y5Y6 855 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 CNTNAP4Q9C0A0 1308 aa7.69□□□□□ -1.18
PTPRK-202ENST00000368205 SUPT5HO00267 1087 aaKnown RBP7.68□□□□□ -1.18
PTPRK-202ENST00000368205 TSPAN15O95858 294 aa7.68□□□□□ -1.18
PTPRK-202ENST00000368205 WIPI1Q5MNZ9 446 aaPredicted RBP7.68□□□□□ -1.18
PTPRK-202ENST00000368205 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.68□□□□□ -1.18
PTPRK-202ENST00000368205 THAP5Q7Z6K1 395 aa7.68□□□□□ -1.18
PTPRK-202ENST00000368205 CCDC120Q96HB5 630 aa7.68□□□□□ -1.18
PTPRK-202ENST00000368205 KIRREL1Q96J84 757 aa7.68□□□□□ -1.18
PTPRK-202ENST00000368205 PPP1R16BQ96T49 567 aa7.68□□□□□ -1.18
PTPRK-202ENST00000368205 TACC3Q9Y6A5 838 aa7.68□□□□□ -1.18
PTPRK-202ENST00000368205 CST3P01034 146 aaPredicted RBP7.67□□□□□ -1.18
PTPRK-202ENST00000368205 ETF1P62495 437 aaKnown RBP7.67□□□□□ -1.18
PTPRK-202ENST00000368205 RPS26P62854 115 aaKnown RBP7.67□□□□□ -1.18
PTPRK-202ENST00000368205 FGD1P98174 961 aa7.67□□□□□ -1.18
PTPRK-202ENST00000368205 CDKAL1Q5VV42 579 aa7.67□□□□□ -1.18
PTPRK-202ENST00000368205 LETMD1Q6P1Q0 360 aa7.67□□□□□ -1.18
PTPRK-202ENST00000368205 KRTAP4-9Q9BYQ8 210 aa7.67□□□□□ -1.18
PTPRK-202ENST00000368205 TTF2Q9UNY4 1162 aaKnown RBP7.67□□□□□ -1.18
PTPRK-202ENST00000368205 H3BS24 57 aa7.66□□□□□ -1.18
PTPRK-202ENST00000368205 KIR3DL1P43629 444 aa7.66□□□□□ -1.18
PTPRK-202ENST00000368205 RAP1GAPP47736 663 aa7.66□□□□□ -1.18
PTPRK-202ENST00000368205 TTBK2Q6IQ55 1244 aa7.66□□□□□ -1.18
PTPRK-202ENST00000368205 P4HBP07237 508 aaKnown RBP7.65□□□□□ -1.18
PTPRK-202ENST00000368205 CYP7A1P22680 504 aa7.65□□□□□ -1.18
PTPRK-202ENST00000368205 TMEM67Q5HYA8 995 aa7.65□□□□□ -1.18
PTPRK-202ENST00000368205 PRAMEF13Q5VWM6 474 aa7.65□□□□□ -1.18
PTPRK-202ENST00000368205 RIN3Q8TB24 985 aa7.65□□□□□ -1.18
PTPRK-202ENST00000368205 IVNS1ABPQ9Y6Y0 642 aa7.65□□□□□ -1.18
PTPRK-202ENST00000368205 GFRA2O00451 464 aa7.64□□□□□ -1.19
PTPRK-202ENST00000368205 LDHBP07195 334 aaKnown RBP7.64□□□□□ -1.19
PTPRK-202ENST00000368205 GRK4P32298 578 aa7.64□□□□□ -1.19
PTPRK-202ENST00000368205 CDK8P49336 464 aa7.64□□□□□ -1.19
PTPRK-202ENST00000368205 KCNA1Q09470 495 aa7.64□□□□□ -1.19
PTPRK-202ENST00000368205 PRR23BQ6ZRT6 265 aa7.64□□□□□ -1.19
PTPRK-202ENST00000368205 TOX2Q96NM4 488 aa7.64□□□□□ -1.19
PTPRK-202ENST00000368205 ALPK1Q96QP1 1244 aa7.64□□□□□ -1.19
PTPRK-202ENST00000368205 EIF4BP23588 611 aaKnown RBP7.63□□□□□ -1.19
PTPRK-202ENST00000368205 GNA15P30679 374 aa7.63□□□□□ -1.19
PTPRK-202ENST00000368205 MPZL3Q6UWV2 235 aa7.63□□□□□ -1.19
PTPRK-202ENST00000368205 MRPL41Q8IXM3 137 aaKnown RBP7.63□□□□□ -1.19
PTPRK-202ENST00000368205 PIWIL2Q8TC59 973 aaKnown RBP7.63□□□□□ -1.19
PTPRK-202ENST00000368205 SYDE1Q6ZW31 735 aaPredicted RBP7.62□□□□□ -1.19
PTPRK-202ENST00000368205 C1QL4Q86Z23 238 aa7.62□□□□□ -1.19
PTPRK-202ENST00000368205 UBE2FQ969M7 185 aa7.62□□□□□ -1.19
PTPRK-202ENST00000368205 CBX7O95931 251 aa7.61□□□□□ -1.19
PTPRK-202ENST00000368205 KRT1P04264 644 aa7.61□□□□□ -1.19
PTPRK-202ENST00000368205 CFPP27918 469 aa7.61□□□□□ -1.19
PTPRK-202ENST00000368205 TNK2Q07912 1038 aa7.61□□□□□ -1.19
PTPRK-202ENST00000368205 CCDC85BQ15834 202 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-202ENST00000368205 AGMOQ6ZNB7 445 aa7.61□□□□□ -1.19
PTPRK-202ENST00000368205 TMPRSS7Q7RTY8 843 aa7.61□□□□□ -1.19
PTPRK-202ENST00000368205 FBXO15Q8NCQ5 510 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-202ENST00000368205 PRPF40AO75400 957 aaKnown RBP7.6□□□□□ -1.19
PTPRK-202ENST00000368205 SEPT6Q14141 434 aa7.6□□□□□ -1.19
PTPRK-202ENST00000368205 SLC6A19Q695T7 634 aa7.6□□□□□ -1.19
PTPRK-202ENST00000368205 CDH24Q86UP0 819 aa7.6□□□□□ -1.19
PTPRK-202ENST00000368205 ZSCAN18Q8TBC5 510 aaPredicted RBP7.6□□□□□ -1.19
PTPRK-202ENST00000368205 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
PTPRK-202ENST00000368205 ZSWIM5Q9P217 1185 aa7.6□□□□□ -1.19
PTPRK-202ENST00000368205 TJP2Q9UDY2 1190 aa7.6□□□□□ -1.19
PTPRK-202ENST00000368205 PCDHB5Q9Y5E4 795 aa7.6□□□□□ -1.19
PTPRK-202ENST00000368205 ESR1P03372 595 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 RAC2P15153 192 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 LMNB1P20700 586 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 ETV3P41162 512 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 ANKLE2Q86XL3 938 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 SIAH1Q8IUQ4 282 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 TMEM87BQ96K49 555 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 AK5Q9Y6K8 562 aa7.59□□□□□ -1.19
PTPRK-202ENST00000368205 LIG3P49916 1009 aa7.58□□□□□ -1.2
PTPRK-202ENST00000368205 LRRC56Q8IYG6 542 aaPredicted RBP7.58□□□□□ -1.2
PTPRK-202ENST00000368205 SLAMF8Q9P0V8 285 aa7.58□□□□□ -1.2
PTPRK-202ENST00000368205 TMEM59LQ9UK28 342 aa7.58□□□□□ -1.2
PTPRK-202ENST00000368205 NFIBO00712 420 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 PGRP06401 933 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 C1QTNF9P0C862 333 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 PDE4BQ07343 736 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 TTC6Q86TZ1 520 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 MCATQ8IVS2 390 aaKnown RBP7.57□□□□□ -1.2
PTPRK-202ENST00000368205 DNAJB8Q8NHS0 232 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 ABHD4Q8TB40 342 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 MIR1-1HGQ9H1L0 117 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 NSUN3Q9H649 340 aaKnown RBP7.57□□□□□ -1.2
PTPRK-202ENST00000368205 ADAM30Q9UKF2 790 aa7.57□□□□□ -1.2
PTPRK-202ENST00000368205 DNAJC25-GNG10A0A024R161 153 aa7.56□□□□□ -1.2
PTPRK-202ENST00000368205 RPL6Q02878 288 aaKnown RBP7.56□□□□□ -1.2
PTPRK-202ENST00000368205 TSNAXIP1Q2TAA8 658 aa7.56□□□□□ -1.2
PTPRK-202ENST00000368205 RALGPS1Q5JS13 557 aa7.56□□□□□ -1.2
PTPRK-202ENST00000368205 LCNL1Q6ZST4 164 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms