RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 Q3C1V9 767 aa18.34■□□□□ 0.53
VAMP4-202ENST00000367740 ADAMTS19Q8TE59 1207 aa18.34■□□□□ 0.53
VAMP4-202ENST00000367740 PDLIM7Q9NR12 457 aa18.34■□□□□ 0.53
VAMP4-202ENST00000367740 BTDP43251 543 aa18.33■□□□□ 0.52
VAMP4-202ENST00000367740 MTMR2Q13614 643 aa18.33■□□□□ 0.52
VAMP4-202ENST00000367740 POTEEQ6S8J3 1075 aa18.33■□□□□ 0.52
VAMP4-202ENST00000367740 PLEKHH3Q7Z736 793 aa18.33■□□□□ 0.52
VAMP4-202ENST00000367740 MSCO60682 206 aa18.32■□□□□ 0.52
VAMP4-202ENST00000367740 MAP2K5Q13163 448 aa18.32■□□□□ 0.52
VAMP4-202ENST00000367740 SNX17Q15036 470 aa18.32■□□□□ 0.52
VAMP4-202ENST00000367740 SLC39A5Q6ZMH5 540 aa18.32■□□□□ 0.52
VAMP4-202ENST00000367740 SH3RF1Q7Z6J0 888 aa18.32■□□□□ 0.52
VAMP4-202ENST00000367740 ATXN2LQ8WWM7 1075 aaKnown RBP18.32■□□□□ 0.52
VAMP4-202ENST00000367740 AS3MTQ9HBK9 375 aa18.32■□□□□ 0.52
VAMP4-202ENST00000367740 TRIM43BA6NCK2 446 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 BACE1P56817 501 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 RHBDL3P58872 404 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
VAMP4-202ENST00000367740 TRIM60Q495X7 471 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 DZIP1Q86YF9 867 aaKnown RBP18.31■□□□□ 0.52
VAMP4-202ENST00000367740 TRIM43Q96BQ3 446 aaPredicted RBP18.31■□□□□ 0.52
VAMP4-202ENST00000367740 RNPC3Q96LT9 517 aaKnown RBP18.31■□□□□ 0.52
VAMP4-202ENST00000367740 ASB2Q96Q27 587 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
VAMP4-202ENST00000367740 MROH7-TTC4A0A0A0MT08 1334 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 EYA2O00167 538 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 SEMA3EO15041 775 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 DNAJB2P25686 324 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 CNGA1P29973 690 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 PHKA1P46020 1223 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 EPHB4P54760 987 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 GJC2Q5T442 439 aaPredicted RBP18.3■□□□□ 0.52
VAMP4-202ENST00000367740 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
VAMP4-202ENST00000367740 TRPV1Q8NER1 839 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 FAM163AQ96GL9 167 aaPredicted RBP18.3■□□□□ 0.52
VAMP4-202ENST00000367740 UHRF1Q96T88 793 aaPredicted RBP18.3■□□□□ 0.52
VAMP4-202ENST00000367740 WDR18Q9BV38 432 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 GNL3LQ9NVN8 582 aaKnown RBP18.3■□□□□ 0.52
VAMP4-202ENST00000367740 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 THEGQ9P2T0 379 aa18.3■□□□□ 0.52
VAMP4-202ENST00000367740 SYNGAP1Q96PV0 1343 aa18.29■□□□□ 0.52
VAMP4-202ENST00000367740 CHD7Q9P2D1 2997 aa18.29■□□□□ 0.52
VAMP4-202ENST00000367740 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
VAMP4-202ENST00000367740 ATG9AQ7Z3C6 839 aa18.29■□□□□ 0.52
VAMP4-202ENST00000367740 ZGPATQ8N5A5 531 aaKnown RBP18.29■□□□□ 0.52
VAMP4-202ENST00000367740 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
VAMP4-202ENST00000367740 ITGB8P26012 769 aa18.28■□□□□ 0.52
VAMP4-202ENST00000367740 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
VAMP4-202ENST00000367740 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
VAMP4-202ENST00000367740 ZNF576Q9H609 170 aa18.28■□□□□ 0.52
VAMP4-202ENST00000367740 ZNF236Q9UL36 1845 aa18.28■□□□□ 0.52
VAMP4-202ENST00000367740 CDK5RAP2Q96SN8 1893 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 PLXNA1Q9UIW2 1896 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 CYBAP13498 195 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 CYP2C19P33261 490 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 SLF2Q8IX21 1173 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 ZNF384Q8TF68 577 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 GTF3C2Q8WUA4 911 aaPredicted RBP18.27■□□□□ 0.52
VAMP4-202ENST00000367740 PPM1EQ8WY54 764 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.52
VAMP4-202ENST00000367740 NDUFB9Q9Y6M9 179 aa18.27■□□□□ 0.52
VAMP4-202ENST00000367740 TCF20Q9UGU0 1960 aaKnown RBP18.26■□□□□ 0.51
VAMP4-202ENST00000367740 GPR75-ASB3A0A0A6YYF3 556 aa18.26■□□□□ 0.51
VAMP4-202ENST00000367740 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
VAMP4-202ENST00000367740 ZBTB22O15209 634 aa18.26■□□□□ 0.51
VAMP4-202ENST00000367740 CNMDO75829 334 aa18.26■□□□□ 0.51
VAMP4-202ENST00000367740 IGHA2P01877 340 aa18.26■□□□□ 0.51
VAMP4-202ENST00000367740 JAG1P78504 1218 aa18.26■□□□□ 0.51
VAMP4-202ENST00000367740 CWC22Q9HCG8 908 aaKnown RBP18.26■□□□□ 0.51
VAMP4-202ENST00000367740 ABCF2Q9UG63 623 aa18.26■□□□□ 0.51
VAMP4-202ENST00000367740 HOXC6P09630 235 aa18.25■□□□□ 0.51
VAMP4-202ENST00000367740 MRPS5P82675 430 aaKnown RBP18.25■□□□□ 0.51
VAMP4-202ENST00000367740 RASGRF1Q13972 1273 aa18.25■□□□□ 0.51
VAMP4-202ENST00000367740 SHROOM1Q2M3G4 852 aaPredicted RBP18.25■□□□□ 0.51
VAMP4-202ENST00000367740 ARRDC4Q8NCT1 418 aa18.25■□□□□ 0.51
VAMP4-202ENST00000367740 NPLOC4Q8TAT6 608 aa18.25■□□□□ 0.51
VAMP4-202ENST00000367740 HERC5Q9UII4 1024 aaKnown RBP18.25■□□□□ 0.51
VAMP4-202ENST00000367740 FOCADQ5VW36 1801 aa18.25■□□□□ 0.51
VAMP4-202ENST00000367740 PDS5AQ29RF7 1337 aaKnown RBP18.24■□□□□ 0.51
VAMP4-202ENST00000367740 SLC15A5A6NIM6 579 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 C19orf81C9J6K1 198 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 USP17L10C9JJH3 530 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 PTPREP23469 700 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 MECOMQ03112 1051 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 AKNAD1Q5T1N1 836 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 C1orf53Q5VUE5 145 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 TIFAQ96CG3 184 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 GAS2L1Q99501 681 aaPredicted RBP18.24■□□□□ 0.51
VAMP4-202ENST00000367740 C1QTNF1Q9BXJ1 281 aa18.24■□□□□ 0.51
VAMP4-202ENST00000367740 ARIH1Q9Y4X5 557 aaPredicted RBP18.24■□□□□ 0.51
VAMP4-202ENST00000367740 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
VAMP4-202ENST00000367740 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.23■□□□□ 0.51
VAMP4-202ENST00000367740 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.23■□□□□ 0.51
VAMP4-202ENST00000367740 GLRX3O76003 335 aaKnown RBP18.23■□□□□ 0.51
VAMP4-202ENST00000367740 ASNSP08243 561 aa18.23■□□□□ 0.51
VAMP4-202ENST00000367740 ADORA1P30542 326 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms