RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CPLX2Q6PUV4 134 aaKnown RBP16.88■□□□□ 0.29
PRKN-204ENST00000366896 LDHAL6AQ6ZMR3 332 aa16.88■□□□□ 0.29
PRKN-204ENST00000366896 MYO5AQ9Y4I1 1855 aaKnown RBP16.88■□□□□ 0.29
PRKN-204ENST00000366896 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
PRKN-204ENST00000366896 CDC27P30260 824 aa16.88■□□□□ 0.29
PRKN-204ENST00000366896 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
PRKN-204ENST00000366896 PHKBQ93100 1093 aa16.88■□□□□ 0.29
PRKN-204ENST00000366896 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
PRKN-204ENST00000366896 ALG1Q9BT22 464 aa16.88■□□□□ 0.29
PRKN-204ENST00000366896 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.88■□□□□ 0.29
PRKN-204ENST00000366896 PHLPP2Q6ZVD8 1323 aa16.88■□□□□ 0.29
PRKN-204ENST00000366896 NRDCO43847 1150 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 IDH1O75874 414 aaKnown RBP16.87■□□□□ 0.29
PRKN-204ENST00000366896 ETF1P62495 437 aaKnown RBP16.87■□□□□ 0.29
PRKN-204ENST00000366896 SGMS1Q86VZ5 419 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 VPS37DQ86XT2 251 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 B4E1Z4 1266 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 APPP05067 770 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 VGLL2Q8N8G2 317 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 CELF1Q92879 486 aaKnown RBP16.87■□□□□ 0.29
PRKN-204ENST00000366896 MTFR1LQ9H019 292 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 INCENPQ9NQS7 918 aa16.87■□□□□ 0.29
PRKN-204ENST00000366896 ARGLU1Q9NWB6 273 aaPredicted RBP16.87■□□□□ 0.29
PRKN-204ENST00000366896 ZNF532Q9HCE3 1301 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 STK36Q9NRP7 1315 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 UBE2Q2LH0YL09 131 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 CAPN2P17655 700 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 IGHMBP2P38935 993 aaKnown RBP16.86■□□□□ 0.29
PRKN-204ENST00000366896 HNRNPH2P55795 449 aaKnown RBP16.86■□□□□ 0.29
PRKN-204ENST00000366896 KRT40Q6A162 431 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 APOA5Q6Q788 366 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 CNNM1Q9NRU3 951 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 ECM29Q5VYK3 1845 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 NID2Q14112 1375 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 ARID4AP29374 1257 aaPredicted RBP16.86■□□□□ 0.29
PRKN-204ENST00000366896 PHKA1P46020 1223 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 PTPAQ15257 358 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 TMCO3Q6UWJ1 677 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 ANKRD18AQ8IVF6 992 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 MPHOSPH8Q99549 860 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
PRKN-204ENST00000366896 COL11A2P13942 1736 aaPredicted RBP16.85■□□□□ 0.29
PRKN-204ENST00000366896 CCP110O43303 1012 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 SHC4Q6S5L8 630 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 UBXN4Q92575 508 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 RPGRQ92834 1020 aaKnown RBP16.85■□□□□ 0.29
PRKN-204ENST00000366896 HSD3B7Q9H2F3 369 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
PRKN-204ENST00000366896 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 ATP1A3P13637 1013 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 PDE6AP16499 860 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
PRKN-204ENST00000366896 LIFRP42702 1097 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 SYKP43405 635 aa16.85■□□□□ 0.29
PRKN-204ENST00000366896 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
PRKN-204ENST00000366896 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
PRKN-204ENST00000366896 HOXA10P31260 410 aaPredicted RBP16.84■□□□□ 0.29
PRKN-204ENST00000366896 PDE6BP35913 854 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 RPS8P62241 208 aaKnown RBP16.84■□□□□ 0.29
PRKN-204ENST00000366896 NTRK3Q16288 839 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 CLIC6Q96NY7 704 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 MAP3K14Q99558 947 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 CBFA2T2O43439 604 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 ATP8B1O43520 1251 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 CUTAO60888 179 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 GRAPQ13588 217 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 TEX35Q5T0J7 233 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 RESP18Q5W5W9 173 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 CCDC102BQ68D86 513 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
PRKN-204ENST00000366896 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 UBXN6Q9BZV1 441 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
PRKN-204ENST00000366896 DNAI1Q9UI46 699 aa16.84■□□□□ 0.29
PRKN-204ENST00000366896 C10orf71Q711Q0 1435 aa16.83■□□□□ 0.29
PRKN-204ENST00000366896 TCRBV5S4A2TA0A5A2 114 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 TADA3O75528 432 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 PDE8BO95263 885 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 PNOCQ13519 176 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 TRIM65Q6PJ69 517 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 RBM17Q96I25 401 aaKnown RBP16.83■□□□□ 0.28
PRKN-204ENST00000366896 MTA3Q9BTC8 594 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 FAM217BQ9NTX9 383 aaPredicted RBP16.83■□□□□ 0.28
PRKN-204ENST00000366896 MROH5Q6ZUA9 1318 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 A0A1B0GUL6 1792 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 VGLL3A8MV65 326 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 SRGNP10124 158 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 FANCCQ00597 558 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 TSPYL1Q9H0U9 437 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 LY9Q9HBG7 655 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 TACC3Q9Y6A5 838 aa16.83■□□□□ 0.28
PRKN-204ENST00000366896 ZBTB43O43298 467 aa16.82■□□□□ 0.28
PRKN-204ENST00000366896 GNL2Q13823 731 aaKnown RBP16.82■□□□□ 0.28
PRKN-204ENST00000366896 HELBQ8NG08 1087 aaPredicted RBP16.82■□□□□ 0.28
PRKN-204ENST00000366896 EPB41L4AQ9HCS5 686 aaPredicted RBP16.82■□□□□ 0.28
PRKN-204ENST00000366896 GOLGA8AA7E2F4 631 aa16.81■□□□□ 0.28
PRKN-204ENST00000366896 EFCAB8A8MWE9 144 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms