RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 CHGBP05060 677 aa20.42■□□□□ 0.86
PRKN-202ENST00000366892 HMGCS2P54868 508 aa20.42■□□□□ 0.86
PRKN-202ENST00000366892 TATDN1Q6P1N9 297 aa20.42■□□□□ 0.86
PRKN-202ENST00000366892 LCORLQ8N3X6 602 aa20.42■□□□□ 0.86
PRKN-202ENST00000366892 PROCA1Q8NCQ7 364 aaPredicted RBP20.42■□□□□ 0.86
PRKN-202ENST00000366892 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.42■□□□□ 0.86
PRKN-202ENST00000366892 GINM1Q9NU53 330 aa20.42■□□□□ 0.86
PRKN-202ENST00000366892 GNRH1P01148 92 aa20.41■□□□□ 0.86
PRKN-202ENST00000366892 PSMC4P43686 418 aa20.41■□□□□ 0.86
PRKN-202ENST00000366892 SH3D19Q5HYK7 790 aa20.41■□□□□ 0.86
PRKN-202ENST00000366892 SDR42E1Q8WUS8 393 aa20.41■□□□□ 0.86
PRKN-202ENST00000366892 ARMT1Q9H993 441 aa20.41■□□□□ 0.86
PRKN-202ENST00000366892 ZBTB21Q9ULJ3 1066 aa20.41■□□□□ 0.86
PRKN-202ENST00000366892 PTCH2Q9Y6C5 1203 aa20.41■□□□□ 0.86
PRKN-202ENST00000366892 POLR3DP05423 398 aaPredicted RBP20.4■□□□□ 0.86
PRKN-202ENST00000366892 UBE3CQ15386 1083 aa20.4■□□□□ 0.86
PRKN-202ENST00000366892 ARMC5Q96C12 935 aa20.4■□□□□ 0.86
PRKN-202ENST00000366892 TRIM47Q96LD4 638 aa20.4■□□□□ 0.86
PRKN-202ENST00000366892 DCP1AQ9NPI6 582 aaPredicted RBP20.4■□□□□ 0.86
PRKN-202ENST00000366892 TNRC18O15417 2968 aaPredicted RBP20.4■□□□□ 0.86
PRKN-202ENST00000366892 BACE1P56817 501 aa20.39■□□□□ 0.85
PRKN-202ENST00000366892 SMCR8Q8TEV9 937 aaPredicted RBP20.39■□□□□ 0.85
PRKN-202ENST00000366892 MCM9Q9NXL9 1143 aa20.39■□□□□ 0.85
PRKN-202ENST00000366892 PTPRFP10586 1907 aa20.39■□□□□ 0.85
PRKN-202ENST00000366892 MBD4O95243 580 aa20.38■□□□□ 0.85
PRKN-202ENST00000366892 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
PRKN-202ENST00000366892 GH2P01242 217 aa20.38■□□□□ 0.85
PRKN-202ENST00000366892 MTMR2Q13614 643 aa20.38■□□□□ 0.85
PRKN-202ENST00000366892 TSHZ3Q63HK5 1081 aa20.38■□□□□ 0.85
PRKN-202ENST00000366892 GPATCH3Q96I76 525 aa20.38■□□□□ 0.85
PRKN-202ENST00000366892 MKI67P46013 3256 aaKnown RBP20.38■□□□□ 0.85
PRKN-202ENST00000366892 MYH1P12882 1939 aa20.38■□□□□ 0.85
PRKN-202ENST00000366892 USP17L10C9JJH3 530 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 PRKAB2O43741 272 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 SHMT1P34896 483 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 EVX2Q03828 476 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 GABPAQ06546 454 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 CERKLQ49MI3 558 aaPredicted RBP20.37■□□□□ 0.85
PRKN-202ENST00000366892 ZSCAN25Q6NSZ9 544 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 PNMA3Q9UL41 463 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 ATAD5Q96QE3 1844 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 C19orf81C9J6K1 198 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 PRMT2P55345 433 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 PABPC4Q13310 644 aaKnown RBP eCLIP20.37■□□□□ 0.85
PRKN-202ENST00000366892 SLC9C1Q4G0N8 1177 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 SRRDQ9UH36 339 aa20.37■□□□□ 0.85
PRKN-202ENST00000366892 OSBPP22059 807 aa20.36■□□□□ 0.85
PRKN-202ENST00000366892 HOXD10P28358 340 aa20.36■□□□□ 0.85
PRKN-202ENST00000366892 NBPF11Q86T75 865 aa20.36■□□□□ 0.85
PRKN-202ENST00000366892 ZNF333Q96JL9 665 aa20.36■□□□□ 0.85
PRKN-202ENST00000366892 PUS7LQ9H0K6 701 aaKnown RBP20.36■□□□□ 0.85
PRKN-202ENST00000366892 ATP8A2Q9NTI2 1148 aa20.36■□□□□ 0.85
PRKN-202ENST00000366892 TMOD4Q9NZQ9 345 aa20.36■□□□□ 0.85
PRKN-202ENST00000366892 ZSWIM8A7E2V4 1837 aa20.35■□□□□ 0.85
PRKN-202ENST00000366892 ABCB5Q2M3G0 1257 aa20.35■□□□□ 0.85
PRKN-202ENST00000366892 ANKRD13CQ8N6S4 541 aa20.35■□□□□ 0.85
PRKN-202ENST00000366892 KBTBD3Q8NAB2 608 aa20.35■□□□□ 0.85
PRKN-202ENST00000366892 ASCC2Q9H1I8 757 aaPredicted RBP20.35■□□□□ 0.85
PRKN-202ENST00000366892 CYP2D6P10635 497 aa20.34■□□□□ 0.85
PRKN-202ENST00000366892 HOXA7P31268 230 aaPredicted RBP20.34■□□□□ 0.85
PRKN-202ENST00000366892 FCGRTP55899 365 aa20.34■□□□□ 0.85
PRKN-202ENST00000366892 RAB3GAP1Q15042 981 aa20.34■□□□□ 0.85
PRKN-202ENST00000366892 OTUD7AQ8TE49 926 aaPredicted RBP20.34■□□□□ 0.85
PRKN-202ENST00000366892 EMILIN3Q9NT22 766 aa20.34■□□□□ 0.85
PRKN-202ENST00000366892 POTEFA5A3E0 1075 aa20.33■□□□□ 0.85
PRKN-202ENST00000366892 SH3TC2Q8TF17 1288 aa20.33■□□□□ 0.85
PRKN-202ENST00000366892 CABP5Q9NP86 173 aa20.33■□□□□ 0.85
PRKN-202ENST00000366892 TTC41PQ6P2S7 1318 aa20.33■□□□□ 0.85
PRKN-202ENST00000366892 KIAA0100Q14667 2235 aaKnown RBP20.33■□□□□ 0.84
PRKN-202ENST00000366892 GCLCP48506 637 aaPredicted RBP20.32■□□□□ 0.84
PRKN-202ENST00000366892 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
PRKN-202ENST00000366892 FAM110CQ1W6H9 321 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 PI4K2BQ8TCG2 481 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 SLC4A4Q9Y6R1 1079 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 MYPNQ86TC9 1320 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 GUCY1A2P33402 732 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 PRKCZQ05513 592 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 ANKRD45Q5TZF3 282 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 USP17L2Q6R6M4 530 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 RAET1EQ8TD07 263 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 DYNLL2Q96FJ2 89 aa20.32■□□□□ 0.84
PRKN-202ENST00000366892 P2RX7Q99572 595 aaKnown RBP20.32■□□□□ 0.84
PRKN-202ENST00000366892 LOC285556D6RIA3 1793 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 USP17L21D6R901 530 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 SMIM22K7EJ46 135 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 ERC2O15083 957 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 RNF113AO15541 343 aaKnown RBP20.31■□□□□ 0.84
PRKN-202ENST00000366892 C12orf60Q5U649 245 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 SLC44A5Q8NCS7 719 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 ACER1Q8TDN7 264 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 OSBP2Q969R2 916 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 GCC1Q96CN9 775 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 STRBPQ96SI9 672 aaKnown RBP20.31■□□□□ 0.84
PRKN-202ENST00000366892 SWAP70Q9UH65 585 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 GABRQQ9UN88 632 aa20.31■□□□□ 0.84
PRKN-202ENST00000366892 DDX60LQ5H9U9 1706 aaKnown RBP20.31■□□□□ 0.84
PRKN-202ENST00000366892 CYP2D7A0A087X1C5 515 aa20.3■□□□□ 0.84
PRKN-202ENST00000366892 TNPO2O14787 897 aaKnown RBP20.3■□□□□ 0.84
PRKN-202ENST00000366892 GLRX3O76003 335 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms