RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 RAB11FIP4Q86YS3 637 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 ZNF512BQ96KM6 892 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 TSPY3P0CV98 308 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 TSPY8P0CW00 308 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CACNA2D4Q7Z3S7 1137 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 MAP2P11137 1827 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 KIF23Q02241 960 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 UBE4AQ14139 1066 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 MCM6Q14566 821 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 TMTC1Q8IUR5 882 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 PLA2G12BQ9BX93 195 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 EXOC1Q9NV70 894 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 SLAIN2Q9P270 581 aa6.04□□□□□ -1.44
CDC42BPA-204ENST00000366767 CTAGE9A4FU28 777 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 FOXO4P98177 505 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 NOSTRINQ8IVI9 506 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC50Q8IVM0 306 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 TCHPQ9BT92 498 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 BTG4Q9NY30 223 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 DDAH1O94760 285 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 IFNAR1P17181 557 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 NDUFA8P51970 172 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 OSBP2Q969R2 916 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 RNF26Q9BY78 433 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 CTDP1Q9Y5B0 961 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 IFI16Q16666 785 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 WWC2Q6AWC2 1192 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 MIPOL1Q8TD10 442 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 CPLX3Q8WVH0 158 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 ARPP21Q9UBL0 812 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 KRT86O43790 486 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 PDE6AP16499 860 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 ERCC5P28715 1186 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 AFMP43652 599 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 ALX1Q15699 326 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 ALS2CR12Q96Q35 445 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 XPO4Q9C0E2 1151 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 MTMR7Q9Y216 660 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 KIF4AO95239 1232 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 FBF1Q8TES7 1133 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 TRIM47Q96LD4 638 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC43Q96MW1 224 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 NAP1L3Q99457 506 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 ANKIB1Q9P2G1 1089 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 HIBADHP31937 336 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 SEMA3FQ13275 785 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 ANKS4BQ8N8V4 417 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 TSGA10Q9BZW7 698 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 PYCARDQ9ULZ3 195 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 STK24Q9Y6E0 443 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 POLR2DO15514 142 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 PPP1R12BO60237 982 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 TRAPPC10P48553 1259 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 EXOSC10Q01780 885 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 CYP26C1Q6V0L0 522 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 BICDL1Q6ZP65 573 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 ATRIPQ8WXE1 791 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 RPGRQ92834 1020 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 MON2Q7Z3U7 1717 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 TNS3Q68CZ2 1445 aa6.03□□□□□ -1.44
CDC42BPA-204ENST00000366767 SH2B2O14492 632 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 KIF3CO14782 793 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZNF804AQ7Z570 1209 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 CHAMP1Q96JM3 812 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 CLIC4Q9Y696 253 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 C1orf167Q5SNV9 1468 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 CYP27B1O15528 508 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 RAD21O60216 631 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 TTC38Q5R3I4 469 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 NLRP10Q86W26 655 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 FANCBQ8NB91 859 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZSWIM4Q9H7M6 989 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 AXIN2Q9Y2T1 843 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 NDUFB9Q9Y6M9 179 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 STX10O60499 249 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 KCNJ6P48051 423 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 ETF1P62495 437 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 PPARAQ07869 468 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 APOA5Q6Q788 366 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 LMNTD2Q8IXW0 634 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZNF654Q8IZM8 581 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 BUB1BO60566 1050 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 IKQ13123 557 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 EPHA10Q5JZY3 1008 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZNF579Q8NAF0 562 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 PGBD1Q96JS3 809 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 EHMT1Q9H9B1 1298 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 VIRMAQ69YN4 1812 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 M0R2C6 588 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 PDIA6Q15084 440 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 OTUD7BQ6GQQ9 843 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 RRP36Q96EU6 259 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 GLT8D2Q9H1C3 349 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 GCKP35557 465 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 SPECC1Q5M775 1068 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 VPS36Q86VN1 386 aa6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 HELBQ8NG08 1087 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-204ENST00000366767 SERTAD1Q9UHV2 236 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms