RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 ARPP21Q9UBL0 812 aaPredicted RBP11.19□□□□□ -0.62
MRPL55-216ENST00000366744 SWAP70Q9UH65 585 aa11.19□□□□□ -0.62
MRPL55-216ENST00000366744 AFG3L2Q9Y4W6 797 aa11.19□□□□□ -0.62
MRPL55-216ENST00000366744 TRIM17Q9Y577 477 aa11.19□□□□□ -0.62
MRPL55-216ENST00000366744 LAMA4Q16363 1823 aa11.19□□□□□ -0.62
MRPL55-216ENST00000366744 CCDC85CA6NKD9 419 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 MPHOSPH10O00566 681 aaKnown RBP11.18□□□□□ -0.62
MRPL55-216ENST00000366744 TLR2O60603 784 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 TDO2P48775 406 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 SPP2Q13103 211 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 ABCB5Q2M3G0 1257 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 CERKLQ49MI3 558 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-216ENST00000366744 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
MRPL55-216ENST00000366744 PI4K2BQ8TCG2 481 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 NACAP1Q9BZK3 213 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 DNAJC18Q9H819 358 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 DCP1AQ9NPI6 582 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-216ENST00000366744 AGTPBP1Q9UPW5 1226 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
MRPL55-216ENST00000366744 GH2P01242 217 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 APPP05067 770 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 SLURP2P0DP57 97 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 HMGCS2P54868 508 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 IRX6P78412 446 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-216ENST00000366744 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-216ENST00000366744 MTMR2Q13614 643 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 RAB3GAP1Q15042 981 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 FBXO46Q6PJ61 603 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-216ENST00000366744 CHD1LQ86WJ1 897 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 CD99L2Q8TCZ2 262 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-216ENST00000366744 EVI5LQ96CN4 794 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 EFCC1Q9HA90 598 aa11.17□□□□□ -0.62
MRPL55-216ENST00000366744 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-216ENST00000366744 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-216ENST00000366744 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 C19orf81C9J6K1 198 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 GPAA1O43292 621 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 GNRH1P01148 92 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 OSBPP22059 807 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 USP14P54578 494 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 PDE1AP54750 535 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 TATDN1Q6P1N9 297 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 CCDC84Q86UT8 332 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-216ENST00000366744 WDR18Q9BV38 432 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 PUS7LQ9H0K6 701 aaKnown RBP11.16□□□□□ -0.62
MRPL55-216ENST00000366744 R3HDMLQ9H3Y0 253 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 SH2D4AQ9H788 454 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 ZNF287Q9HBT7 754 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 PARP14Q460N5 1801 aa11.16□□□□□ -0.62
MRPL55-216ENST00000366744 SALL3Q9BXA9 1300 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 PRKAB2O43741 272 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 SLC3A2P08195 630 aaKnown RBP11.15□□□□□ -0.62
MRPL55-216ENST00000366744 CYP2C8P10632 490 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 PLCD1P51178 756 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 BACE1P56817 501 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 LACTBP83111 547 aaPredicted RBP11.15□□□□□ -0.62
MRPL55-216ENST00000366744 SLFNL1Q499Z3 407 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 TMEM179Q6ZVK1 233 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 ARHGEF10LQ9HCE6 1279 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 STAP2Q9UGK3 403 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 CPA4Q9UI42 421 aa11.15□□□□□ -0.62
MRPL55-216ENST00000366744 USP17L12C9JPN9 530 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L21D6R901 530 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 HOXD10P28358 340 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 SHMT1P34896 483 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 GCLCP48506 637 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-216ENST00000366744 FCGRTP55899 365 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 NUCB1Q02818 461 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 MOGSQ13724 837 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
MRPL55-216ENST00000366744 USP17L2Q6R6M4 530 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 TICAM2Q86XR7 235 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 RILPL2Q969X0 211 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 STRBPQ96SI9 672 aaKnown RBP11.14□□□□□ -0.63
MRPL55-216ENST00000366744 NAPBQ9H115 298 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 ROBO3Q96MS0 1386 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 PLXNB2O15031 1838 aa11.14□□□□□ -0.63
MRPL55-216ENST00000366744 DOCK3Q8IZD9 2030 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 A0A0G2JMZ2 1700 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 M0R2C6 588 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
MRPL55-216ENST00000366744 CYP2D6P10635 497 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
MRPL55-216ENST00000366744 PRMT2P55345 433 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 RRP1BQ14684 758 aaKnown RBP11.13□□□□□ -0.63
MRPL55-216ENST00000366744 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 TREML2Q5T2D2 321 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 C12orf60Q5U649 245 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 GPAT2Q6NUI2 795 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
MRPL55-216ENST00000366744 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
MRPL55-216ENST00000366744 GTF3C2Q8WUA4 911 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms