RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 SMCR8Q8TEV9 937 aaPredicted RBP28.58■■■□□ 2.17
SHC1-201ENST00000366442 ECHDC1Q9NTX5 307 aa28.58■■■□□ 2.17
SHC1-201ENST00000366442 SRRDQ9UH36 339 aa28.58■■■□□ 2.17
SHC1-201ENST00000366442 ZBTB21Q9ULJ3 1066 aa28.58■■■□□ 2.17
SHC1-201ENST00000366442 GDF11O95390 407 aa28.57■■■□□ 2.16
SHC1-201ENST00000366442 BACE1P56817 501 aa28.57■■■□□ 2.16
SHC1-201ENST00000366442 ZNF333Q96JL9 665 aa28.57■■■□□ 2.16
SHC1-201ENST00000366442 NAV1Q8NEY1 1877 aa28.57■■■□□ 2.16
SHC1-201ENST00000366442 FMNL1O95466 1100 aaPredicted RBP28.56■■■□□ 2.16
SHC1-201ENST00000366442 FCGRTP55899 365 aa28.56■■■□□ 2.16
SHC1-201ENST00000366442 RBBP6Q7Z6E9 1792 aaKnown RBP28.56■■■□□ 2.16
SHC1-201ENST00000366442 PCDHB15Q9Y5E8 787 aa28.56■■■□□ 2.16
SHC1-201ENST00000366442 C19orf81C9J6K1 198 aa28.55■■■□□ 2.16
SHC1-201ENST00000366442 OSBPP22059 807 aa28.55■■■□□ 2.16
SHC1-201ENST00000366442 MTMR2Q13614 643 aa28.55■■■□□ 2.16
SHC1-201ENST00000366442 LCORLQ8N3X6 602 aa28.55■■■□□ 2.16
SHC1-201ENST00000366442 KIAA0100Q14667 2235 aaKnown RBP28.54■■■□□ 2.16
SHC1-201ENST00000366442 BRCA2P51587 3418 aa28.54■■■□□ 2.16
SHC1-201ENST00000366442 MYH7P12883 1935 aa28.54■■■□□ 2.16
SHC1-201ENST00000366442 POLR3DP05423 398 aaPredicted RBP28.54■■■□□ 2.16
SHC1-201ENST00000366442 PLCD1P51178 756 aa28.54■■■□□ 2.16
SHC1-201ENST00000366442 UBE3CQ15386 1083 aa28.54■■■□□ 2.16
SHC1-201ENST00000366442 SHROOM1Q2M3G4 852 aaPredicted RBP28.54■■■□□ 2.16
SHC1-201ENST00000366442 GPATCH3Q96I76 525 aa28.54■■■□□ 2.16
SHC1-201ENST00000366442 DCP1AQ9NPI6 582 aaPredicted RBP28.54■■■□□ 2.16
SHC1-201ENST00000366442 MGAMO43451 1857 aa28.54■■■□□ 2.16
SHC1-201ENST00000366442 USP17L10C9JJH3 530 aa28.53■■■□□ 2.16
SHC1-201ENST00000366442 GH2P01242 217 aa28.53■■■□□ 2.16
SHC1-201ENST00000366442 ZSCAN25Q6NSZ9 544 aa28.53■■■□□ 2.16
SHC1-201ENST00000366442 MCM9Q9NXL9 1143 aa28.53■■■□□ 2.16
SHC1-201ENST00000366442 TMOD4Q9NZQ9 345 aa28.53■■■□□ 2.16
SHC1-201ENST00000366442 PDE4DIPQ5VU43 2346 aa28.52■■■□□ 2.16
SHC1-201ENST00000366442 MYPNQ86TC9 1320 aa28.52■■■□□ 2.16
SHC1-201ENST00000366442 GCLCP48506 637 aaPredicted RBP28.52■■■□□ 2.16
SHC1-201ENST00000366442 GABPAQ06546 454 aa28.52■■■□□ 2.16
SHC1-201ENST00000366442 FAM110CQ1W6H9 321 aa28.52■■■□□ 2.16
SHC1-201ENST00000366442 CERKLQ49MI3 558 aaPredicted RBP28.52■■■□□ 2.16
SHC1-201ENST00000366442 SDR42E1Q8WUS8 393 aa28.52■■■□□ 2.16
SHC1-201ENST00000366442 YTHDC1Q96MU7 727 aaKnown RBP28.52■■■□□ 2.16
SHC1-201ENST00000366442 ARMT1Q9H993 441 aa28.52■■■□□ 2.16
SHC1-201ENST00000366442 TAOK2Q9UL54 1235 aa28.52■■■□□ 2.16
SHC1-201ENST00000366442 POTEFA5A3E0 1075 aa28.51■■■□□ 2.15
SHC1-201ENST00000366442 ECM2O94769 699 aaPredicted RBP28.51■■■□□ 2.15
SHC1-201ENST00000366442 MBD4O95243 580 aa28.51■■■□□ 2.15
SHC1-201ENST00000366442 HOXA7P31268 230 aaPredicted RBP28.51■■■□□ 2.15
SHC1-201ENST00000366442 SHMT1P34896 483 aa28.51■■■□□ 2.15
SHC1-201ENST00000366442 ANKRD13CQ8N6S4 541 aa28.51■■■□□ 2.15
SHC1-201ENST00000366442 ASCC2Q9H1I8 757 aaPredicted RBP28.51■■■□□ 2.15
SHC1-201ENST00000366442 ATP8A2Q9NTI2 1148 aa28.51■■■□□ 2.15
SHC1-201ENST00000366442 RAET1EQ8TD07 263 aa28.5■■■□□ 2.15
SHC1-201ENST00000366442 TMEM106CQ9BVX2 250 aa28.5■■■□□ 2.15
SHC1-201ENST00000366442 ABCB5Q2M3G0 1257 aa28.49■■■□□ 2.15
SHC1-201ENST00000366442 SLFNL1Q499Z3 407 aa28.49■■■□□ 2.15
SHC1-201ENST00000366442 SH3TC2Q8TF17 1288 aa28.49■■■□□ 2.15
SHC1-201ENST00000366442 PRKCZQ05513 592 aa28.48■■■□□ 2.15
SHC1-201ENST00000366442 USP17L2Q6R6M4 530 aa28.48■■■□□ 2.15
SHC1-201ENST00000366442 CABP5Q9NP86 173 aa28.48■■■□□ 2.15
SHC1-201ENST00000366442 IRX3P78415 501 aaPredicted RBP28.47■■■□□ 2.15
SHC1-201ENST00000366442 CRBNQ96SW2 442 aa28.47■■■□□ 2.15
SHC1-201ENST00000366442 TNPO2O14787 897 aaKnown RBP28.46■■■□□ 2.15
SHC1-201ENST00000366442 CHGBP05060 677 aa28.46■■■□□ 2.15
SHC1-201ENST00000366442 GRK4P32298 578 aa28.46■■■□□ 2.15
SHC1-201ENST00000366442 RAB3GAP1Q15042 981 aa28.46■■■□□ 2.15
SHC1-201ENST00000366442 KBTBD3Q8NAB2 608 aa28.46■■■□□ 2.15
SHC1-201ENST00000366442 C12orf42Q96LP6 360 aa28.46■■■□□ 2.15
SHC1-201ENST00000366442 EMILIN3Q9NT22 766 aa28.46■■■□□ 2.15
SHC1-201ENST00000366442 TTC41PQ6P2S7 1318 aa28.45■■■□□ 2.15
SHC1-201ENST00000366442 MKI67P46013 3256 aaKnown RBP28.45■■■□□ 2.15
SHC1-201ENST00000366442 PRKAB2O43741 272 aa28.45■■■□□ 2.14
SHC1-201ENST00000366442 SWAP70Q9UH65 585 aa28.45■■■□□ 2.14
SHC1-201ENST00000366442 USP14P54578 494 aa28.44■■■□□ 2.14
SHC1-201ENST00000366442 EVX2Q03828 476 aa28.44■■■□□ 2.14
SHC1-201ENST00000366442 TSHZ3Q63HK5 1081 aa28.44■■■□□ 2.14
SHC1-201ENST00000366442 SLAIN1Q8ND83 568 aa28.44■■■□□ 2.14
SHC1-201ENST00000366442 DDRGK1Q96HY6 314 aa28.44■■■□□ 2.14
SHC1-201ENST00000366442 PUS7LQ9H0K6 701 aaKnown RBP28.44■■■□□ 2.14
SHC1-201ENST00000366442 MORF4L1Q9UBU8 362 aa28.44■■■□□ 2.14
SHC1-201ENST00000366442 GABRQQ9UN88 632 aa28.44■■■□□ 2.14
SHC1-201ENST00000366442 CYP2D6P10635 497 aa28.43■■■□□ 2.14
SHC1-201ENST00000366442 AMOTL1Q8IY63 956 aa28.43■■■□□ 2.14
SHC1-201ENST00000366442 COA7Q96BR5 231 aa28.43■■■□□ 2.14
SHC1-201ENST00000366442 P2RX7Q99572 595 aaKnown RBP28.43■■■□□ 2.14
SHC1-201ENST00000366442 FEZ1Q99689 392 aa28.43■■■□□ 2.14
SHC1-201ENST00000366442 KIAA1683Q9H0B3 1180 aa28.43■■■□□ 2.14
SHC1-201ENST00000366442 BAZ2AQ9UIF9 1905 aaKnown RBP28.42■■■□□ 2.14
SHC1-201ENST00000366442 ERC2O15083 957 aa28.42■■■□□ 2.14
SHC1-201ENST00000366442 EN2P19622 333 aaPredicted RBP28.42■■■□□ 2.14
SHC1-201ENST00000366442 GUCY1A2P33402 732 aa28.42■■■□□ 2.14
SHC1-201ENST00000366442 FLT3LGP49771 235 aa28.42■■■□□ 2.14
SHC1-201ENST00000366442 IRF5Q13568 498 aa28.42■■■□□ 2.14
SHC1-201ENST00000366442 AAMPQ13685 434 aa28.42■■■□□ 2.14
SHC1-201ENST00000366442 GTF3C2Q8WUA4 911 aaPredicted RBP28.42■■■□□ 2.14
SHC1-201ENST00000366442 SLC4A4Q9Y6R1 1079 aa28.42■■■□□ 2.14
SHC1-201ENST00000366442 ZFYP08048 801 aaPredicted RBP28.41■■■□□ 2.14
SHC1-201ENST00000366442 HERVK_113P62684 666 aa28.41■■■□□ 2.14
SHC1-201ENST00000366442 C12orf60Q5U649 245 aa28.41■■■□□ 2.14
SHC1-201ENST00000366442 HDAC1Q13547 482 aaPredicted RBP28.4■■■□□ 2.14
SHC1-201ENST00000366442 ACER1Q8TDN7 264 aa28.4■■■□□ 2.14
SHC1-201ENST00000366442 PXYLP1Q8TE99 480 aa28.4■■■□□ 2.14
SHC1-201ENST00000366442 APPBP2Q92624 585 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms