RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-202ENST00000366197 VPS54Q9P1Q0 977 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 TXNDC16Q9P2K2 825 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 CTNND2Q9UQB3 1225 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 DNM2P50570 870 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 CALCOCO2Q13137 446 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 MAEAQ7L5Y9 396 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 SEPT12Q8IYM1 358 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 CAPZA3Q96KX2 299 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 ASAP1Q9ULH1 1129 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
ZNF548-202ENST00000366197 CALUO43852 315 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-202ENST00000366197 OPA1O60313 960 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 PDE8BO95263 885 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 TUBBP07437 444 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 ATP8A2Q9NTI2 1148 aa11.53□□□□□ -0.56
ZNF548-202ENST00000366197 TNNC1P63316 161 aa11.52□□□□□ -0.56
ZNF548-202ENST00000366197 TRIM14Q14142 442 aa11.52□□□□□ -0.56
ZNF548-202ENST00000366197 DCAF15Q66K64 600 aa11.52□□□□□ -0.56
ZNF548-202ENST00000366197 BRINP3Q76B58 766 aa11.52□□□□□ -0.56
ZNF548-202ENST00000366197 KIFC2Q96AC6 838 aa11.52□□□□□ -0.56
ZNF548-202ENST00000366197 STMN4Q9H169 189 aaPredicted RBP11.52□□□□□ -0.56
ZNF548-202ENST00000366197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.52□□□□□ -0.56
ZNF548-202ENST00000366197 COPRSQ9NQ92 184 aa11.52□□□□□ -0.56
ZNF548-202ENST00000366197 MTRF1LQ9UGC7 380 aaKnown RBP11.52□□□□□ -0.56
ZNF548-202ENST00000366197 KCNG1Q9UIX4 513 aa11.52□□□□□ -0.56
ZNF548-202ENST00000366197 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 JAK2O60674 1132 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 PAK1Q13153 545 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 HS1BP3Q53T59 392 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 NLRX1Q86UT6 975 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 KIAA1524Q8TCG1 905 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 NOX5Q96PH1 765 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 MBD5Q9P267 1494 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 CHRNDQ07001 517 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 C6orf163Q5TEZ5 329 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 DYMQ7RTS9 669 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 UNC5CLQ8IV45 518 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
ZNF548-202ENST00000366197 PAIP2Q9BPZ3 127 aaKnown RBP11.52□□□□□ -0.57
ZNF548-202ENST00000366197 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.52□□□□□ -0.57
ZNF548-202ENST00000366197 SPOPO43791 374 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 EXOC3O60645 756 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 LRRC24Q50LG9 513 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 MYCT1Q8N699 235 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 AS3MTQ9HBK9 375 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
ZNF548-202ENST00000366197 EAPPQ56P03 285 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-202ENST00000366197 FBF1Q8TES7 1133 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 ZNF274Q96GC6 653 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-202ENST00000366197 CLSTN2Q9H4D0 955 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 CALCOCO1Q9P1Z2 691 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 PNMA1Q8ND90 353 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 MAK16Q9BXY0 300 aaKnown RBP11.51□□□□□ -0.57
ZNF548-202ENST00000366197 NT5C3AQ9H0P0 336 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 AFF2P51816 1311 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 ZMYM4Q5VZL5 1548 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 MYO5CQ9NQX4 1742 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 ATP2A2P16615 1042 aaKnown RBP11.51□□□□□ -0.57
ZNF548-202ENST00000366197 PPP1R7Q15435 360 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 SYT10Q6XYQ8 523 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 CABP7Q86V35 215 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 SDR42E1Q8WUS8 393 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 HAUS7Q99871 368 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 TSGA10Q9BZW7 698 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 NFE2L3Q9Y4A8 694 aa11.51□□□□□ -0.57
ZNF548-202ENST00000366197 CLCN1P35523 988 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 GNPTABQ3T906 1256 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 FANCBQ8NB91 859 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 GREM2Q9H772 168 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 FAM169AQ9Y6X4 670 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 A0A0D9SFI3 127 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 TLDC2A0PJX2 215 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 NDC80O14777 642 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 HSPD1P10809 573 aaKnown RBP11.5□□□□□ -0.57
ZNF548-202ENST00000366197 SCNN1DP51172 638 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 MRPS9P82933 396 aaKnown RBP11.5□□□□□ -0.57
ZNF548-202ENST00000366197 INF2Q27J81 1249 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 SEL1L2Q5TEA6 688 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 KRT222Q8N1A0 295 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 ATRIPQ8WXE1 791 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 GLG1Q92896 1179 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 JAKMIP2Q96AA8 810 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 ZNF804BA4D1E1 1349 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 SYNRGQ9UMZ2 1314 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 GAS7O60861 476 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 RAD51AP2Q09MP3 1159 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 MYSM1Q5VVJ2 828 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 CCDC84Q86UT8 332 aaPredicted RBP11.5□□□□□ -0.57
ZNF548-202ENST00000366197 PPM1EQ8WY54 764 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 NUP58Q9BVL2 599 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 CSRNP2Q9H175 543 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 RIMBP3CA6NJZ7 1639 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 RIMBP3BA6NNM3 1639 aa11.5□□□□□ -0.57
ZNF548-202ENST00000366197 RIMBP3Q9UFD9 1639 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms