RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 STK26Q9P289 416 aa7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 ADGRF5Q8IZF2 1346 aa7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 PRAG1Q86YV5 1406 aa7.68□□□□□ -1.18
RNU4-4P-201ENST00000364588 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 MEGF11A6BM72 1044 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 DHX15O43143 795 aaKnown RBP7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 SART1O43290 800 aaKnown RBP7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 CYP11A1P05108 521 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 MAPK8P45983 427 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 HNRNPUQ00839 825 aaKnown RBP eCLIP7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 WAPLQ7Z5K2 1190 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 EPS8L3Q8TE67 593 aaKnown RBP7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 CYP4F12Q9HCS2 524 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 HIF3AQ9Y2N7 669 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 CCDC144AA2RUR9 1427 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 CDC42BPGQ6DT37 1551 aa7.67□□□□□ -1.18
RNU4-4P-201ENST00000364588 IFT172Q9UG01 1749 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 PRSS36Q5K4E3 855 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 NUTM2GQ5VZR2 741 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 ALG1LQ6GMV1 187 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 TMEM132EQ6IEE7 984 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 DTHD1Q6ZMT9 781 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 FAM46AQ96IP4 442 aaKnown RBP7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 SRCIN1Q9C0H9 1055 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 SUGCTQ9HAC7 445 aa7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 COL22A1Q8NFW1 1626 aaPredicted RBP7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 MARF1Q9Y4F3 1742 aaKnown RBP7.66□□□□□ -1.18
RNU4-4P-201ENST00000364588 GSC2O15499 205 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 GAS2O43903 313 aaKnown RBP7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 FGD1P98174 961 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 AP3B2Q13367 1082 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 ZNF423Q2M1K9 1284 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 SPATA31E1Q6ZUB1 1445 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 NPHP3Q7Z494 1330 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 GLIS3Q8NEA6 775 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 PXDNQ92626 1479 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 MYRFLQ96LU7 910 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 UBL7Q96S82 380 aaPredicted RBP7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 CORO1BQ9BR76 489 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 TMPRSS13Q9BYE2 586 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 NRSN2Q9GZP1 204 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 TRPC5Q9UL62 973 aaPredicted RBP7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 PLEKHH1Q9ULM0 1364 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 RAXQ9Y2V3 346 aa7.65□□□□□ -1.18
RNU4-4P-201ENST00000364588 RGPD8O14715 1765 aaPredicted RBP7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 KNDC1Q76NI1 1749 aa7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 MYOM2P54296 1465 aa7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 LRPPRCP42704 1394 aaKnown RBP7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 ITGB7P26010 798 aa7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 PREPP48147 710 aa7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 SLC51AQ86UW1 340 aa7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 SMG8Q8ND04 991 aaKnown RBP7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 MPHOSPH9Q99550 1183 aa7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 FMN2Q9NZ56 1722 aa7.64□□□□□ -1.19
RNU4-4P-201ENST00000364588 TECPR2O15040 1411 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 ATRNO75882 1429 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 ANKRD30BQ9BXX2 1392 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 GIPC1O14908 333 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 FCGRTP55899 365 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 COL19A1Q14993 1142 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 POU4F3Q15319 338 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 PI16Q6UXB8 463 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 SPG7Q9UQ90 795 aa7.63□□□□□ -1.19
RNU4-4P-201ENST00000364588 BCL9LQ86UU0 1499 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 PIK3C2GO75747 1445 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 YTHDC2Q9H6S0 1430 aaKnown RBP7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 ABCC11Q96J66 1382 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 MAOBP27338 520 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 GSTT1P30711 240 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 PPP2R3AQ06190 1150 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 EXOSC6Q5RKV6 272 aaKnown RBP7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 ZMYM1Q5SVZ6 1142 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 ARMC10Q8N2F6 343 aa7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 TRIM56Q9BRZ2 755 aaKnown RBP7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 GPN3Q9UHW5 284 aaPredicted RBP7.62□□□□□ -1.19
RNU4-4P-201ENST00000364588 KIF1AQ12756 1690 aa7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 TIAF1O95411 115 aa7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 P4HBP07237 508 aaKnown RBP7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 FSTP19883 344 aa7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 SAFB2Q14151 953 aaKnown RBP eCLIP7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 FAM20CQ8IXL6 584 aa7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 STOML1Q9UBI4 398 aa7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 PPM1HQ9ULR3 514 aa7.61□□□□□ -1.19
RNU4-4P-201ENST00000364588 SPATA31A3Q5VYP0 1347 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 EP400Q96L91 3159 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 LDHBP07195 334 aaKnown RBP7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 NXPE4Q6UWF7 544 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 KRT28Q7Z3Y7 464 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 C12orf50Q8NA57 414 aaPredicted RBP7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 FRMD6Q96NE9 622 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 YIPF2Q9BWQ6 316 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 TMEM39AQ9NV64 488 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 USP32Q8NFA0 1604 aa7.6□□□□□ -1.19
RNU4-4P-201ENST00000364588 BRWD3Q6RI45 1802 aa7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 GLI3P10071 1580 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms