RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 FGAP02671 866 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 SLC4A8Q2Y0W8 1093 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 TMEM139Q8IV31 216 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 SMYD4Q8IYR2 804 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-201ENST00000361716 N4BP2L2Q92802 583 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-201ENST00000361716 FAM89AQ96GI7 184 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 HSD3B7Q9H2F3 369 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 CNNM1Q9NRU3 951 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 KCNH3Q9ULD8 1083 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 IQSEC3Q9UPP2 1182 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-201ENST00000361716 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.36□□□□□ -0.11
VAMP1-201ENST00000361716 ADGRG1Q9Y653 693 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 BRD2P25440 801 aaKnown RBP14.36□□□□□ -0.11
VAMP1-201ENST00000361716 CASP1P29466 404 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 CDC25AP30304 524 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 SAFBQ15424 915 aaKnown RBP eCLIP14.36□□□□□ -0.11
VAMP1-201ENST00000361716 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 JMYQ8N9B5 988 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 EEF2KMTQ96G04 330 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 ZNF609O15014 1411 aa14.36□□□□□ -0.11
VAMP1-201ENST00000361716 GOLGA6BA6NDN3 693 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 POLR2DO15514 142 aaKnown RBP14.35□□□□□ -0.11
VAMP1-201ENST00000361716 CMA1P23946 247 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 SND1Q7KZF4 910 aaKnown RBP eCLIP14.35□□□□□ -0.11
VAMP1-201ENST00000361716 VPS37DQ86XT2 251 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 JADE2Q9NQC1 790 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 MAPK8IP1Q9UQF2 711 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 MAST3O60307 1309 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 FDPSP14324 419 aaKnown RBP14.35□□□□□ -0.11
VAMP1-201ENST00000361716 IARSP41252 1262 aaKnown RBP14.35□□□□□ -0.11
VAMP1-201ENST00000361716 ZAP70P43403 619 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 CDR1P51861 262 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 PDCLQ13371 301 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 E2F5Q15329 346 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 METTL24Q5JXM2 366 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 HAUS7Q99871 368 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 BPIFA3Q9BQP9 254 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 VPS16Q9H269 839 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 COL15A1P39059 1388 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 GOLGA8AA7E2F4 631 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 FILIP1LQ4L180 1135 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 SLC9C2Q5TAH2 1124 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 KCNH5Q8NCM2 988 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 NCOA7Q8NI08 942 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
VAMP1-201ENST00000361716 SNRPA1P09661 255 aaKnown RBP14.34□□□□□ -0.11
VAMP1-201ENST00000361716 ZNF622Q969S3 477 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAMP1-201ENST00000361716 IFIT3O14879 490 aaKnown RBP14.34□□□□□ -0.11
VAMP1-201ENST00000361716 YEATS4O95619 227 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 RPSAP08865 295 aaKnown RBP14.34□□□□□ -0.11
VAMP1-201ENST00000361716 DONSONQ9NYP3 566 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 HOXB7P09629 217 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 LRCH2Q5VUJ6 765 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 KRT40Q6A162 431 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 ATL3Q6DD88 541 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 ANKRD18AQ8IVF6 992 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 CEP89Q96ST8 783 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 PEAK1Q9H792 1746 aa14.34□□□□□ -0.11
VAMP1-201ENST00000361716 N4BP3O15049 544 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 IRAK1P51617 712 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 SHC4Q6S5L8 630 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 METTL16Q86W50 562 aaKnown RBP14.33□□□□□ -0.12
VAMP1-201ENST00000361716 FOXP4Q8IVH2 680 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-201ENST00000361716 PUS7LQ9H0K6 701 aaKnown RBP14.33□□□□□ -0.12
VAMP1-201ENST00000361716 SLAIN2Q9P270 581 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 MMP14P50281 582 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 KIAA1328Q86T90 577 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 SUGP1Q8IWZ8 645 aaKnown RBP14.33□□□□□ -0.12
VAMP1-201ENST00000361716 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-201ENST00000361716 ADGRL3Q9HAR2 1447 aa14.33□□□□□ -0.12
VAMP1-201ENST00000361716 USP42Q9H9J4 1324 aaKnown RBP14.33□□□□□ -0.12
VAMP1-201ENST00000361716 MINDY4BA8MYZ0 360 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 NUTM2AQ8IVF1 878 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 HNRNPLLQ8WVV9 542 aaKnown RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 USP31Q70CQ4 1352 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 MED23Q9ULK4 1368 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 GPAA1O43292 621 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 SYF2O95926 243 aaKnown RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 NAA25Q14CX7 972 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 CADPS2Q86UW7 1296 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 CTCFLQ8NI51 663 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 CABS1Q96KC9 395 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 TEX13AQ9BXU3 409 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 CWC25Q9NXE8 425 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 SNAP23O00161 211 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
VAMP1-201ENST00000361716 SYNE4Q8N205 404 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 COPRSQ9NQ92 184 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
VAMP1-201ENST00000361716 SKAP2O75563 359 aaPredicted RBP14.31□□□□□ -0.12
VAMP1-201ENST00000361716 SLC7A5Q01650 507 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
VAMP1-201ENST00000361716 KCNV1Q6PIU1 500 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms