RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 TFAP4Q01664 338 aa20.03■□□□□ 0.8
LMNA-202ENST00000361308 FAM47AQ5JRC9 791 aa20.03■□□□□ 0.8
LMNA-202ENST00000361308 CHST3Q7LGC8 479 aa20.03■□□□□ 0.8
LMNA-202ENST00000361308 CCDC17Q96LX7 622 aa20.03■□□□□ 0.8
LMNA-202ENST00000361308 COL9A3Q14050 684 aaPredicted RBP20.02■□□□□ 0.8
LMNA-202ENST00000361308 NKX2-3Q8TAU0 364 aa20.02■□□□□ 0.8
LMNA-202ENST00000361308 CDCA5Q96FF9 252 aa20.02■□□□□ 0.8
LMNA-202ENST00000361308 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.79
LMNA-202ENST00000361308 CHADLQ6NUI6 762 aa20.02■□□□□ 0.79
LMNA-202ENST00000361308 CYB5R4Q7L1T6 521 aa20.02■□□□□ 0.79
LMNA-202ENST00000361308 IQCA1Q86XH1 822 aa20.02■□□□□ 0.79
LMNA-202ENST00000361308 ZNF341Q9BYN7 854 aa20.02■□□□□ 0.79
LMNA-202ENST00000361308 PDRG1Q9NUG6 133 aa20.02■□□□□ 0.79
LMNA-202ENST00000361308 PRC1O43663 620 aa20.01■□□□□ 0.79
LMNA-202ENST00000361308 FGD1P98174 961 aa20.01■□□□□ 0.79
LMNA-202ENST00000361308 IL27Q8NEV9 243 aa20.01■□□□□ 0.79
LMNA-202ENST00000361308 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
LMNA-202ENST00000361308 MPHOSPH10O00566 681 aaKnown RBP20■□□□□ 0.79
LMNA-202ENST00000361308 PPP1R12BO60237 982 aaPredicted RBP20■□□□□ 0.79
LMNA-202ENST00000361308 AKR1B1P15121 316 aa20■□□□□ 0.79
LMNA-202ENST00000361308 SART3Q15020 963 aaKnown RBP20■□□□□ 0.79
LMNA-202ENST00000361308 ZKSCAN3Q9BRR0 538 aa20■□□□□ 0.79
LMNA-202ENST00000361308 UBAC1Q9BSL1 405 aa20■□□□□ 0.79
LMNA-202ENST00000361308 SIPA1L1O43166 1804 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 ERICH2A1L162 156 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 KIF3CO14782 793 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 ST18O60284 1047 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 ANTXR2P58335 489 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 PRKG1Q13976 671 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 ABCB5Q2M3G0 1257 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 NEDD1Q8NHV4 660 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 CABP5Q9NP86 173 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 WDR19Q8NEZ3 1342 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 TRAF5O00463 557 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 IFIT3O14879 490 aaKnown RBP19.99■□□□□ 0.79
LMNA-202ENST00000361308 GDF11O95390 407 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 TMEM87BQ96K49 555 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
LMNA-202ENST00000361308 MTA3Q9BTC8 594 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 LRRC2Q9BYS8 371 aa19.99■□□□□ 0.79
LMNA-202ENST00000361308 CAP2P40123 477 aa19.98■□□□□ 0.79
LMNA-202ENST00000361308 RRP1BQ14684 758 aaKnown RBP19.98■□□□□ 0.79
LMNA-202ENST00000361308 Q6ZUG5 572 aa19.98■□□□□ 0.79
LMNA-202ENST00000361308 TCP11L1Q9NUJ3 509 aa19.98■□□□□ 0.79
LMNA-202ENST00000361308 FZD1Q9UP38 647 aa19.98■□□□□ 0.79
LMNA-202ENST00000361308 CTNND1O60716 968 aaKnown RBP19.97■□□□□ 0.79
LMNA-202ENST00000361308 USP2O75604 605 aaPredicted RBP19.97■□□□□ 0.79
LMNA-202ENST00000361308 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 IGDCC4Q8TDY8 1250 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 KLRG1Q96E93 195 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 TTC14Q96N46 770 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 WRNIP1Q96S55 665 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 ZNF408Q9H9D4 720 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 IL17RBQ9NRM6 502 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 ZNF112Q9UJU3 913 aa19.97■□□□□ 0.79
LMNA-202ENST00000361308 NMT2O60551 498 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 GH2P01242 217 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 TTLL12Q14166 644 aaPredicted RBP19.96■□□□□ 0.79
LMNA-202ENST00000361308 TMEM67Q5HYA8 995 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 TMEM179Q6ZVK1 233 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 ZNF784Q8NCA9 323 aaPredicted RBP19.96■□□□□ 0.79
LMNA-202ENST00000361308 ALDH8A1Q9H2A2 487 aaPredicted RBP19.96■□□□□ 0.79
LMNA-202ENST00000361308 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
LMNA-202ENST00000361308 SSC5DA1L4H1 1573 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 TNKSO95271 1327 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 ITGBL1O95965 494 aaPredicted RBP19.96■□□□□ 0.79
LMNA-202ENST00000361308 IREB2P48200 963 aaKnown RBP19.96■□□□□ 0.79
LMNA-202ENST00000361308 FMR1Q06787 632 aaKnown RBP eCLIP19.96■□□□□ 0.791e-8■■■□□ 16.7
LMNA-202ENST00000361308 RAB3GAP1Q15042 981 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 ANKRD1Q15327 319 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 FBXL16Q8N461 479 aa19.96■□□□□ 0.79
LMNA-202ENST00000361308 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.96■□□□□ 0.79
LMNA-202ENST00000361308 ANGEL1Q9UNK9 670 aaKnown RBP19.96■□□□□ 0.79
LMNA-202ENST00000361308 ASNSP08243 561 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 INPP5BP32019 993 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 AK2P54819 239 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 WTAPQ15007 396 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 DGKHQ86XP1 1220 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 TMTC2Q8N394 836 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 CEP95Q96GE4 821 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 KANSL2Q9H9L4 492 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 STX8Q9UNK0 236 aa19.95■□□□□ 0.78
LMNA-202ENST00000361308 SH2B2O14492 632 aaPredicted RBP19.94■□□□□ 0.78
LMNA-202ENST00000361308 TOMM70O94826 608 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 JAG1P78504 1218 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 MAP3K9P80192 1104 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 SEPT2Q15019 361 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 SHROOM1Q2M3G4 852 aaPredicted RBP19.94■□□□□ 0.78
LMNA-202ENST00000361308 PPP4R3BQ5MIZ7 849 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 ARMC9Q7Z3E5 817 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 ENAHQ8N8S7 591 aaPredicted RBP19.94■□□□□ 0.78
LMNA-202ENST00000361308 SMC1BQ8NDV3 1235 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 BRF1Q92994 677 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 ZKSCAN4Q969J2 545 aaPredicted RBP19.94■□□□□ 0.78
LMNA-202ENST00000361308 GPHNQ9NQX3 736 aaPredicted RBP19.94■□□□□ 0.78
LMNA-202ENST00000361308 GINM1Q9NU53 330 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 MTMR4Q9NYA4 1195 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 ZBTB21Q9ULJ3 1066 aa19.94■□□□□ 0.78
LMNA-202ENST00000361308 PLIN4Q96Q06 1357 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms