RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 PKN1Q16512 942 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 CCDC144BQ3MJ40 725 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 SPECC1Q5M775 1068 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 RESP18Q5W5W9 173 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.15■■□□□ 1.3
CHD1L-201ENST00000361293 IQCA1Q86XH1 822 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 CLIP2Q9UDT6 1046 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 TPM3P06753 285 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 GRIN1Q05586 938 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 PRR5LQ6MZQ0 368 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 RNF26Q9BY78 433 aaPredicted RBP23.15■■□□□ 1.3
CHD1L-201ENST00000361293 FOXP1Q9H334 677 aaPredicted RBP23.15■■□□□ 1.3
CHD1L-201ENST00000361293 SPTLC3Q9NUV7 552 aa23.15■■□□□ 1.3
CHD1L-201ENST00000361293 DZIP1Q86YF9 867 aaKnown RBP23.14■■□□□ 1.29
CHD1L-201ENST00000361293 VPS54Q9P1Q0 977 aa23.14■■□□□ 1.29
CHD1L-201ENST00000361293 ISM2Q6H9L7 571 aa23.14■■□□□ 1.29
CHD1L-201ENST00000361293 CATIPQ7Z7H3 387 aa23.14■■□□□ 1.29
CHD1L-201ENST00000361293 ATP8A2Q9NTI2 1148 aa23.14■■□□□ 1.29
CHD1L-201ENST00000361293 PCDHB6Q9Y5E3 794 aa23.14■■□□□ 1.29
CHD1L-201ENST00000361293 FAM237AA0A1B0GTK4 181 aa23.13■■□□□ 1.29
CHD1L-201ENST00000361293 FAM205CA6NFA0 338 aa23.13■■□□□ 1.29
CHD1L-201ENST00000361293 CUTAO60888 179 aa23.13■■□□□ 1.29
CHD1L-201ENST00000361293 USP17L8P0C7I0 530 aa23.13■■□□□ 1.29
CHD1L-201ENST00000361293 PCP11498 1178 aaKnown RBP23.13■■□□□ 1.29
CHD1L-201ENST00000361293 ORC4O43929 436 aa23.12■■□□□ 1.29
CHD1L-201ENST00000361293 ONECUT3O60422 494 aaPredicted RBP23.12■■□□□ 1.29
CHD1L-201ENST00000361293 UBR3Q6ZT12 1888 aa23.12■■□□□ 1.29
CHD1L-201ENST00000361293 TIGD1Q96MW7 591 aa23.12■■□□□ 1.29
CHD1L-201ENST00000361293 NAT10Q9H0A0 1025 aaKnown RBP23.12■■□□□ 1.29
CHD1L-201ENST00000361293 ATP2B1P20020 1258 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 DIXDC1Q155Q3 683 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 DNTTIP2Q5QJE6 756 aaKnown RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 KRI1Q8N9T8 703 aaKnown RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 V9GY48 417 aaPredicted RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 BAZ2BQ9UIF8 2168 aaKnown RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 TPM2P07951 284 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 CDC25BP30305 580 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 NLRP12P59046 1061 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 PNOCQ13519 176 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 ZRSR1Q15695 479 aaKnown RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 EARS2Q5JPH6 523 aaKnown RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 MRFAP1L1Q96HT8 127 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 BCL11BQ9C0K0 894 aaPredicted RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 MCM9Q9NXL9 1143 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 ARPP21Q9UBL0 812 aaPredicted RBP23.11■■□□□ 1.29
CHD1L-201ENST00000361293 XDHP47989 1333 aa23.11■■□□□ 1.29
CHD1L-201ENST00000361293 PPP2R5BQ15173 497 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 LONRF3Q496Y0 759 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 RILPL1Q5EBL4 403 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 CABP5Q9NP86 173 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 FBXO2Q9UK22 296 aaPredicted RBP23.1■■□□□ 1.29
CHD1L-201ENST00000361293 LEMD3Q9Y2U8 911 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 GYS1P13807 737 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 TERF1P54274 439 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 AKAP17AQ02040 695 aaKnown RBP23.1■■□□□ 1.29
CHD1L-201ENST00000361293 METTL16Q86W50 562 aaKnown RBP23.1■■□□□ 1.29
CHD1L-201ENST00000361293 KCNH3Q9ULD8 1083 aa23.1■■□□□ 1.29
CHD1L-201ENST00000361293 LDHBP07195 334 aaKnown RBP23.09■■□□□ 1.29
CHD1L-201ENST00000361293 RBM6P78332 1123 aaKnown RBP23.09■■□□□ 1.29
CHD1L-201ENST00000361293 SBK1Q52WX2 424 aa23.09■■□□□ 1.29
CHD1L-201ENST00000361293 CACTINQ8WUQ7 758 aaKnown RBP23.09■■□□□ 1.29
CHD1L-201ENST00000361293 MKRN1Q9UHC7 482 aaKnown RBP23.09■■□□□ 1.29
CHD1L-201ENST00000361293 PRPF3O43395 683 aaKnown RBP23.09■■□□□ 1.29
CHD1L-201ENST00000361293 GPSM2P81274 684 aa23.09■■□□□ 1.29
CHD1L-201ENST00000361293 ARID5BQ14865 1188 aa23.09■■□□□ 1.29
CHD1L-201ENST00000361293 SPTY2D1Q68D10 685 aaPredicted RBP23.09■■□□□ 1.29
CHD1L-201ENST00000361293 TMTC3Q6ZXV5 915 aa23.09■■□□□ 1.29
CHD1L-201ENST00000361293 SH3RF3Q8TEJ3 882 aaPredicted RBP23.09■■□□□ 1.29
CHD1L-201ENST00000361293 TUBE1Q9UJT0 475 aa23.09■■□□□ 1.29
CHD1L-201ENST00000361293 FOXN1O15353 648 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 HSPA1LP34931 641 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 PHF20Q9BVI0 1012 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 CNTNAP5Q8WYK1 1306 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 DDAH1O94760 285 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 PTPREP23469 700 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 RCSD1Q6JBY9 416 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 FOXP4Q8IVH2 680 aaPredicted RBP23.08■■□□□ 1.29
CHD1L-201ENST00000361293 SRBD1Q8N5C6 995 aaKnown RBP23.08■■□□□ 1.29
CHD1L-201ENST00000361293 WDR66Q8TBY9 1149 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 RPGRQ92834 1020 aaKnown RBP23.08■■□□□ 1.29
CHD1L-201ENST00000361293 BPIFA3Q9BQP9 254 aa23.08■■□□□ 1.29
CHD1L-201ENST00000361293 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.29
CHD1L-201ENST00000361293 ADRA2BP18089 450 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 NCAPHQ15003 741 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 NOM1Q5C9Z4 860 aaKnown RBP23.07■■□□□ 1.28
CHD1L-201ENST00000361293 KRBA2Q6ZNG9 492 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 DYNLL2Q96FJ2 89 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 UQCRHLA0A096LP55 91 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 TSPY2A6NKD2 308 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 WNT7AO00755 349 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 UQCRHP07919 91 aa23.07■■□□□ 1.28
CHD1L-201ENST00000361293 CALM1P0DP23 149 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 CALM2P0DP24 149 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 CALM3P0DP25 149 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 PDE4BQ07343 736 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 NPY5RQ15761 445 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 CRY2Q49AN0 593 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 TRPC5Q9UL62 973 aaPredicted RBP23.06■■□□□ 1.28
CHD1L-201ENST00000361293 ZBTB22O15209 634 aa23.06■■□□□ 1.28
CHD1L-201ENST00000361293 SERPINB2P05120 415 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms