RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PRDM10Q9NQV6 1147 aa14.3□□□□□ -0.12
UBA3-202ENST00000361055 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
UBA3-202ENST00000361055 C6orf229H3BNL8 230 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 PPP6R2O75170 966 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 CDKL5O76039 1030 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 HIBADHP31937 336 aaKnown RBP14.29□□□□□ -0.12
UBA3-202ENST00000361055 NCAPHQ15003 741 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 ERO1AQ96HE7 468 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 XPO4Q9C0E2 1151 aaKnown RBP14.29□□□□□ -0.12
UBA3-202ENST00000361055 IFNKQ9P0W0 207 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 FAM237AA0A1B0GTK4 181 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 KIF28PB7ZC32 967 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 NRDCO43847 1150 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 PFKFB1P16118 471 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 TTF1Q15361 905 aaPredicted RBP14.29□□□□□ -0.12
UBA3-202ENST00000361055 TXNRD3Q86VQ6 643 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 TRMT1Q9NXH9 659 aaKnown RBP14.29□□□□□ -0.12
UBA3-202ENST00000361055 TUBE1Q9UJT0 475 aa14.29□□□□□ -0.12
UBA3-202ENST00000361055 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
UBA3-202ENST00000361055 ANGEL1Q9UNK9 670 aaKnown RBP14.29□□□□□ -0.12
UBA3-202ENST00000361055 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
UBA3-202ENST00000361055 ZBTB22O15209 634 aa14.28□□□□□ -0.12
UBA3-202ENST00000361055 C21orf2O43822 256 aa14.28□□□□□ -0.12
UBA3-202ENST00000361055 ADD2P35612 726 aa14.28□□□□□ -0.12
UBA3-202ENST00000361055 CPLX2Q6PUV4 134 aaKnown RBP14.28□□□□□ -0.12
UBA3-202ENST00000361055 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
UBA3-202ENST00000361055 HPSEQ9Y251 543 aa14.28□□□□□ -0.12
UBA3-202ENST00000361055 MORC2Q9Y6X9 1032 aaPredicted RBP14.28□□□□□ -0.12
UBA3-202ENST00000361055 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
UBA3-202ENST00000361055 MYH7P12883 1935 aa14.28□□□□□ -0.12
UBA3-202ENST00000361055 SEMA3EO15041 775 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 WDHD1O75717 1129 aaPredicted RBP14.27□□□□□ -0.12
UBA3-202ENST00000361055 RASGRF1Q13972 1273 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 NAA30Q147X3 362 aaPredicted RBP14.27□□□□□ -0.12
UBA3-202ENST00000361055 UBE3CQ15386 1083 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 DALRD3Q5D0E6 543 aaKnown RBP14.27□□□□□ -0.12
UBA3-202ENST00000361055 SOGA3Q5TF21 947 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 ZNF804AQ7Z570 1209 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 SPATA5Q8NB90 893 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 FBXW7Q969H0 707 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 ALG1Q9BT22 464 aa14.27□□□□□ -0.12
UBA3-202ENST00000361055 MYO5AQ9Y4I1 1855 aaKnown RBP14.27□□□□□ -0.12
UBA3-202ENST00000361055 MYO1BO43795 1136 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 SMC2O95347 1197 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 SFPQP23246 707 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBA3-202ENST00000361055 SYKP43405 635 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 CCDC93Q567U6 631 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 E4F1Q66K89 784 aaPredicted RBP14.27□□□□□ -0.13
UBA3-202ENST00000361055 ARMCX5Q6P1M9 558 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 PI16Q6UXB8 463 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 TMC6Q7Z403 805 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 TMEM87BQ96K49 555 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 GPR101Q96P66 508 aaPredicted RBP14.27□□□□□ -0.13
UBA3-202ENST00000361055 EYA3Q99504 573 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 RTFDC1Q9BY42 306 aaPredicted RBP14.27□□□□□ -0.13
UBA3-202ENST00000361055 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.13
UBA3-202ENST00000361055 GJB4Q9NTQ9 266 aa14.27□□□□□ -0.13
UBA3-202ENST00000361055 ZNF215Q9UL58 517 aaPredicted RBP14.27□□□□□ -0.13
UBA3-202ENST00000361055 SH2B2O14492 632 aaPredicted RBP14.26□□□□□ -0.13
UBA3-202ENST00000361055 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
UBA3-202ENST00000361055 FANCCQ00597 558 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 PTPAQ15257 358 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 ALX1Q15699 326 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 ELOA2Q8IYF1 753 aaPredicted RBP14.26□□□□□ -0.13
UBA3-202ENST00000361055 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
UBA3-202ENST00000361055 ZC3H12CQ9C0D7 883 aaKnown RBP14.26□□□□□ -0.13
UBA3-202ENST00000361055 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 DENND2AQ9ULE3 1009 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 DOCK2Q92608 1830 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 BIN1O00499 593 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 METAP2P50579 478 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBA3-202ENST00000361055 SLC9C2Q5TAH2 1124 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 KRT40Q6A162 431 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 L2HGDHQ9H9P8 463 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
UBA3-202ENST00000361055 GOLGB1Q14789 3259 aaKnown RBP14.25□□□□□ -0.13
UBA3-202ENST00000361055 PDS5AQ29RF7 1337 aaKnown RBP14.25□□□□□ -0.13
UBA3-202ENST00000361055 CCP110O43303 1012 aa14.25□□□□□ -0.13
UBA3-202ENST00000361055 CBFA2T2O43439 604 aa14.25□□□□□ -0.13
UBA3-202ENST00000361055 CYB5R4Q7L1T6 521 aa14.25□□□□□ -0.13
UBA3-202ENST00000361055 SUPT20HQ8NEM7 779 aa14.25□□□□□ -0.13
UBA3-202ENST00000361055 MAP3K14Q99558 947 aa14.25□□□□□ -0.13
UBA3-202ENST00000361055 IQSEC3Q9UPP2 1182 aaPredicted RBP14.25□□□□□ -0.13
UBA3-202ENST00000361055 CUTAO60888 179 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 KIF20AO95235 890 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 MARCKSP29966 332 aaPredicted RBP14.24□□□□□ -0.13
UBA3-202ENST00000361055 RESP18Q5W5W9 173 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 APOA5Q6Q788 366 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 SHC4Q6S5L8 630 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 RAB11FIP4Q86YS3 637 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 NLGN2Q8NFZ4 835 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 IGDCC4Q8TDY8 1250 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 PPP1R13BQ96KQ4 1090 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 FHDC1Q9C0D6 1143 aaPredicted RBP14.24□□□□□ -0.13
UBA3-202ENST00000361055 CD209Q9NNX6 404 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 FER1L6Q2WGJ9 1857 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 RIMBP2O15034 1052 aa14.24□□□□□ -0.13
UBA3-202ENST00000361055 IL1R1P14778 569 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms