RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 TIMM10P62072 90 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 PPFIA1Q13136 1202 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 SF3B2Q13435 895 aaKnown RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 NR1I3Q14994 352 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 WHAMMP3Q1A5X7 153 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 ATL3Q6DD88 541 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 MICU3Q86XE3 530 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 NUTM2AQ8IVF1 878 aaPredicted RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 FMNL3Q8IVF7 1028 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 RUFY1Q96T51 708 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 KLC4Q9NSK0 619 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 DUSP10Q9Y6W6 482 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 PDE2AO00408 941 aaPredicted RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 IPO7O95373 1038 aaKnown RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 HPDP32754 393 aaPredicted RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 CDR1P51861 262 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 POSTNQ15063 836 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 PPANQ9NQ55 473 aaKnown RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 CPSF2Q9P2I0 782 aaKnown RBP9.72□□□□□ -0.85
CD46-206ENST00000360212 KIF20BQ96Q89 1820 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 SALL1Q9NSC2 1324 aa9.72□□□□□ -0.85
CD46-206ENST00000360212 GRM8O00222 908 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 OPLAHO14841 1288 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 PRC1O43663 620 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 MFAP3LO75121 409 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 UPP2O95045 317 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 MYBL1P10243 752 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 HSPD1P10809 573 aaKnown RBP9.71□□□□□ -0.85
CD46-206ENST00000360212 ARHGAP25P42331 645 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 AARSP49588 968 aaKnown RBP eCLIP9.71□□□□□ -0.85
CD46-206ENST00000360212 CCNHP51946 323 aaPredicted RBP9.71□□□□□ -0.85
CD46-206ENST00000360212 EXOSC10Q01780 885 aaKnown RBP9.71□□□□□ -0.85
CD46-206ENST00000360212 WASHC4Q2M389 1173 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 TTC39AQ5SRH9 613 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 TEX11Q8IYF3 940 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 THOC1Q96FV9 657 aaKnown RBP9.71□□□□□ -0.85
CD46-206ENST00000360212 CCDC114Q96M63 670 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 TAB2Q9NYJ8 693 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 ARHGEF10O15013 1369 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 EME2A4GXA9 379 aaPredicted RBP9.71□□□□□ -0.85
CD46-206ENST00000360212 N4BP3O15049 544 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 ZNF18P17022 549 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 KRT9P35527 623 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 FNTAP49354 379 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 CCDC40Q4G0X9 1142 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 CCDC122Q5T0U0 273 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 RASGRP2Q7LDG7 609 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 CMTR1Q8N1G2 835 aaKnown RBP9.71□□□□□ -0.85
CD46-206ENST00000360212 DMGDHQ9UI17 866 aaKnown RBP9.71□□□□□ -0.85
CD46-206ENST00000360212 MCM8Q9UJA3 840 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 SAR1BQ9Y6B6 198 aa9.71□□□□□ -0.85
CD46-206ENST00000360212 ESYT3A0FGR9 886 aa9.71□□□□□ -0.86
CD46-206ENST00000360212 CHUKO15111 745 aa9.71□□□□□ -0.86
CD46-206ENST00000360212 MEFVO15553 781 aaPredicted RBP9.71□□□□□ -0.86
CD46-206ENST00000360212 GBP2P32456 591 aaPredicted RBP9.71□□□□□ -0.86
CD46-206ENST00000360212 FKBP4Q02790 459 aaKnown RBP eCLIP9.71□□□□□ -0.86
CD46-206ENST00000360212 ARMC3Q5W041 872 aa9.71□□□□□ -0.86
CD46-206ENST00000360212 KRT40Q6A162 431 aa9.71□□□□□ -0.86
CD46-206ENST00000360212 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
CD46-206ENST00000360212 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
CD46-206ENST00000360212 SMCR8Q8TEV9 937 aaPredicted RBP9.71□□□□□ -0.86
CD46-206ENST00000360212 JAKMIP2Q96AA8 810 aa9.71□□□□□ -0.86
CD46-206ENST00000360212 ETAA1Q9NY74 926 aa9.71□□□□□ -0.86
CD46-206ENST00000360212 DDX20Q9UHI6 824 aaKnown RBP9.71□□□□□ -0.86
CD46-206ENST00000360212 ANKRD26Q9UPS8 1709 aa9.71□□□□□ -0.86
CD46-206ENST00000360212 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 ENO4A6NNW6 628 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 CD44P16070 742 aaKnown RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 ERCC3P19447 782 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 GCKP35557 465 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 HDLBPQ00341 1268 aaKnown RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 CYP27A1Q02318 531 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 SPRED3Q2MJR0 410 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 TTMPQ5BVD1 217 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 WDR93Q6P2C0 686 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 CCDC13Q8IYE1 715 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 PANX2Q96RD6 677 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 SENP2Q9HC62 589 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 HAUS2Q9NVX0 235 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 KCNJ14Q9UNX9 436 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 RPS6KL1Q9Y6S9 549 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 SHOX2O60902 331 aaPredicted RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 HMGB1P09429 215 aaKnown RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 GCFC2P16383 781 aaKnown RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 CCNI2Q6ZMN8 369 aaPredicted RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 RIC3Q7Z5B4 369 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 RNPC3Q96LT9 517 aaKnown RBP9.7□□□□□ -0.86
CD46-206ENST00000360212 LRRC1Q9BTT6 524 aa9.7□□□□□ -0.86
CD46-206ENST00000360212 BTBD11A6QL63 1104 aa9.69□□□□□ -0.86
CD46-206ENST00000360212 E7EVH7 732 aa9.69□□□□□ -0.86
CD46-206ENST00000360212 AP1G2O75843 785 aa9.69□□□□□ -0.86
CD46-206ENST00000360212 GUCY2FP51841 1108 aa9.69□□□□□ -0.86
CD46-206ENST00000360212 RNASE9P60153 205 aaKnown RBP9.69□□□□□ -0.86
CD46-206ENST00000360212 AMPD2Q01433 879 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms