RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 ZDHHC15Q96MV8 337 aa8.34□□□□□ -1.07
HHLA3-201ENST00000359875 TEPSINQ96N21 525 aa8.34□□□□□ -1.07
HHLA3-201ENST00000359875 PUS3Q9BZE2 481 aaKnown RBP8.34□□□□□ -1.07
HHLA3-201ENST00000359875 TDRD3Q9H7E2 651 aaKnown RBP8.34□□□□□ -1.07
HHLA3-201ENST00000359875 ZCCHC17Q9NP64 241 aaKnown RBP8.34□□□□□ -1.07
HHLA3-201ENST00000359875 JAG2Q9Y219 1238 aa8.34□□□□□ -1.07
HHLA3-201ENST00000359875 PCDHAC2Q9Y5I4 1007 aa8.34□□□□□ -1.07
HHLA3-201ENST00000359875 CSADQ9Y600 493 aa8.34□□□□□ -1.07
HHLA3-201ENST00000359875 EYA2O00167 538 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 GTF2A2P52657 109 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 SLFN5Q08AF3 891 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 LRRC24Q50LG9 513 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 PRPF38BQ5VTL8 546 aaKnown RBP8.33□□□□□ -1.08
HHLA3-201ENST00000359875 HHIPL2Q6UWX4 724 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.33□□□□□ -1.08
HHLA3-201ENST00000359875 WDR66Q8TBY9 1149 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 SSH1Q8WYL5 1049 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 LPIN2Q92539 896 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 OPTNQ96CV9 577 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 USP44Q9H0E7 712 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 FZD1Q9UP38 647 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 TRIM17Q9Y577 477 aa8.33□□□□□ -1.08
HHLA3-201ENST00000359875 CIAO1O76071 339 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 SLC5A1P13866 664 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 FGFR2P21802 821 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 SP3Q02447 781 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 GUCA2AQ02747 115 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 CRHR2Q13324 411 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 VGLL4Q14135 290 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 DCAF15Q66K64 600 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
HHLA3-201ENST00000359875 OTOP1Q7RTM1 612 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 NUDT12Q9BQG2 462 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 R3HDMLQ9H3Y0 253 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 ELP3Q9H9T3 547 aa8.32□□□□□ -1.08
HHLA3-201ENST00000359875 AOX1Q06278 1338 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 TCP10L2B9ZVM9 353 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 TRIM66O15016 1216 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 GNRH1P01148 92 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
HHLA3-201ENST00000359875 MS4A1P11836 297 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
HHLA3-201ENST00000359875 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
HHLA3-201ENST00000359875 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 APOBEC3HQ6NTF7 200 aaKnown RBP8.31□□□□□ -1.08
HHLA3-201ENST00000359875 ERO1BQ86YB8 467 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 PTPN18Q99952 460 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 API5Q9BZZ5 524 aaKnown RBP8.31□□□□□ -1.08
HHLA3-201ENST00000359875 TMEM39BQ9GZU3 492 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 ZFYVE28Q9HCC9 887 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 SMC4Q9NTJ3 1288 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 GNL3LQ9NVN8 582 aaKnown RBP8.31□□□□□ -1.08
HHLA3-201ENST00000359875 IQSEC3Q9UPP2 1182 aaPredicted RBP8.31□□□□□ -1.08
HHLA3-201ENST00000359875 PTPN22Q9Y2R2 807 aa8.31□□□□□ -1.08
HHLA3-201ENST00000359875 SALL1Q9NSC2 1324 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 CCL15-CCL14A0A0B4J2E2 113 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 CETPP11597 493 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 IL15P40933 162 aaPredicted RBP8.3□□□□□ -1.08
HHLA3-201ENST00000359875 RFX5P48382 616 aaPredicted RBP8.3□□□□□ -1.08
HHLA3-201ENST00000359875 SNAPC2Q13487 334 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 MTMR2Q13614 643 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 CCL15Q16663 113 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 PTPRNQ16849 979 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 DIEXFQ68CQ4 756 aaKnown RBP8.3□□□□□ -1.08
HHLA3-201ENST00000359875 TRMT2AQ8IZ69 625 aaKnown RBP8.3□□□□□ -1.08
HHLA3-201ENST00000359875 ZGPATQ8N5A5 531 aaKnown RBP8.3□□□□□ -1.08
HHLA3-201ENST00000359875 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 FAM151AQ8WW52 585 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 SYMPKQ92797 1274 aaKnown RBP8.3□□□□□ -1.08
HHLA3-201ENST00000359875 ARMC5Q96C12 935 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 WRNIP1Q96S55 665 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 EFCC1Q9HA90 598 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 AAASQ9NRG9 546 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 PCDHGC3Q9UN70 934 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 PDE4DIPQ5VU43 2346 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 OTOFQ9HC10 1997 aa8.3□□□□□ -1.08
HHLA3-201ENST00000359875 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 AXIN1O15169 862 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 PRMT2P55345 433 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 PPATQ06203 517 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 PPIL2Q13356 520 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 TAF1CQ15572 869 aaPredicted RBP8.29□□□□□ -1.08
HHLA3-201ENST00000359875 GRIK5Q16478 980 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 ATP2B3Q16720 1220 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 ATG9AQ7Z3C6 839 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 NBPF11Q86T75 865 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 PARP9Q8IXQ6 854 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 BRI3BPQ8WY22 251 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 ARHGAP45Q92619 1136 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 GCC1Q96CN9 775 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 ZNF341Q9BYN7 854 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 CEP126Q9P2H0 1117 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 DENND2AQ9ULE3 1009 aa8.29□□□□□ -1.08
HHLA3-201ENST00000359875 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
HHLA3-201ENST00000359875 TLR2O60603 784 aa8.28□□□□□ -1.08
HHLA3-201ENST00000359875 LDHBP07195 334 aaKnown RBP8.28□□□□□ -1.08
HHLA3-201ENST00000359875 CACNB3P54284 484 aa8.28□□□□□ -1.08
HHLA3-201ENST00000359875 KIF22Q14807 665 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms