RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 RSRC1Q96IZ7 334 aaKnown RBP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 SELENOSQ9BQE4 189 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 PICK1Q9NRD5 415 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 ABCC4O15439 1325 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 CLGNO14967 610 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 ZNF500O60304 480 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-202ENST00000359526 CIAO1O76071 339 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 TBC1D8BQ0IIM8 1120 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 BRDTQ58F21 947 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-202ENST00000359526 IFT81Q8WYA0 676 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 CTNND2Q9UQB3 1225 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 SYNRGQ9UMZ2 1314 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 NCBP1Q09161 790 aaKnown RBP13.66□□□□□ -0.22
DNMT1-202ENST00000359526 CALCOCO2Q13137 446 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 NAA25Q14CX7 972 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 UTP14CQ5TAP6 766 aaKnown RBP13.66□□□□□ -0.22
DNMT1-202ENST00000359526 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 SLC5A4Q9NY91 659 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 ZNF202O95125 648 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 MBD4O95243 580 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 ATP2A2P16615 1042 aaKnown RBP13.66□□□□□ -0.22
DNMT1-202ENST00000359526 MSANTD4Q8NCY6 345 aa13.66□□□□□ -0.22
DNMT1-202ENST00000359526 PARP1P09874 1014 aaKnown RBP13.65□□□□□ -0.22
DNMT1-202ENST00000359526 ARID5AQ03989 594 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 CLUL1Q15846 466 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 SMC6Q96SB8 1091 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 SLC4A8Q2Y0W8 1093 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 SLC27A3Q5K4L6 730 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 DCAF15Q66K64 600 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 DSCC1Q9BVC3 393 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 CEP152O94986 1710 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 SETDB1Q15047 1291 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 ELF2Q15723 593 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 RBM26Q5T8P6 1007 aaKnown RBP13.65□□□□□ -0.22
DNMT1-202ENST00000359526 SEL1L2Q5TEA6 688 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 ZBTB38Q8NAP3 1195 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-202ENST00000359526 CCDC51Q96ER9 411 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
DNMT1-202ENST00000359526 SWAP70Q9UH65 585 aa13.65□□□□□ -0.22
DNMT1-202ENST00000359526 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-202ENST00000359526 PAK1Q13153 545 aa13.65□□□□□ -0.23
DNMT1-202ENST00000359526 ZNF174Q15697 407 aa13.65□□□□□ -0.23
DNMT1-202ENST00000359526 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.23
DNMT1-202ENST00000359526 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
DNMT1-202ENST00000359526 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
DNMT1-202ENST00000359526 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
DNMT1-202ENST00000359526 IFT20Q8IY31 132 aa13.64□□□□□ -0.23
DNMT1-202ENST00000359526 MIGA1Q8NAN2 632 aa13.64□□□□□ -0.23
DNMT1-202ENST00000359526 EPB41P11171 864 aaKnown RBP13.64□□□□□ -0.23
DNMT1-202ENST00000359526 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
DNMT1-202ENST00000359526 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-202ENST00000359526 FCHSD1Q86WN1 690 aa13.64□□□□□ -0.23
DNMT1-202ENST00000359526 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-202ENST00000359526 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
DNMT1-202ENST00000359526 GADD45BO75293 160 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-202ENST00000359526 CCT6AP40227 531 aaKnown RBP13.63□□□□□ -0.23
DNMT1-202ENST00000359526 MXRA7P84157 204 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 PDE4DQ08499 809 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 DPY19L2Q6NUT2 758 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 C8orf74Q6P047 294 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 CARD6Q9BX69 1037 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 B4E1Z4 1266 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 DBNDD2Q9BQY9 259 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 CSRNP2Q9H175 543 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 USP19O94966 1318 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-202ENST00000359526 RXRAP19793 462 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 CTSWP56202 376 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 ZBTB16Q05516 673 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 DIS3L2Q8IYB7 885 aaKnown RBP13.63□□□□□ -0.23
DNMT1-202ENST00000359526 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 TMEM63CQ9P1W3 806 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 ERBB3P21860 1342 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 H7C1D1 291 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 ACTN4O43707 911 aaKnown RBP13.63□□□□□ -0.23
DNMT1-202ENST00000359526 ALDH3A1P30838 453 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 PPP1R7Q15435 360 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
DNMT1-202ENST00000359526 FAM227BQ96M60 508 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
DNMT1-202ENST00000359526 TRAF5O00463 557 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 TEX11Q8IYF3 940 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 IFT74Q96LB3 600 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 FRMD4BQ9Y2L6 1034 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
DNMT1-202ENST00000359526 BBOX1O75936 387 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 MAP2K2P36507 400 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
DNMT1-202ENST00000359526 XAGE2Q96GT9 111 aa13.62□□□□□ -0.23
DNMT1-202ENST00000359526 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms