RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RAD51AP2Q09MP3 1159 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 TCIRG1Q13488 830 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 IFIT1BQ5T764 474 aaKnown RBP7.45□□□□□ -1.22
CSDE1-203ENST00000358528 RESP18Q5W5W9 173 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 NOC3LQ8WTT2 800 aaKnown RBP7.45□□□□□ -1.22
CSDE1-203ENST00000358528 NAPGQ99747 312 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-203ENST00000358528 BPIFA3Q9BQP9 254 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 ADAM21Q9UKJ8 722 aa7.45□□□□□ -1.22
CSDE1-203ENST00000358528 TRIM21P19474 475 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CYP2C19P33261 490 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC181Q5TID7 509 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 NCAPH2Q6IBW4 605 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 IQCA1Q86XH1 822 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 FOXP4Q8IVH2 680 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CTCFLQ8NI51 663 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 RABGGTAQ92696 567 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 UBN2Q6ZU65 1347 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 ADGRL3Q9HAR2 1447 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 A0A0U1RQJ8 604 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 DEXIO95424 95 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 ADD2P35612 726 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 MRPS25P82663 173 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC122Q5T0U0 273 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 AKNAD1Q5T1N1 836 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 ATRIPQ8WXE1 791 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 SYMPKQ92797 1274 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 TANGO6Q9C0B7 1094 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 ABCB6Q9NP58 842 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 XRN1Q8IZH2 1706 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 H0YHG0 523 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 TRIM66O15016 1216 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 UQCRFS1P1P0C7P4 283 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 KRT2P35908 639 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 IGHMBP2P38935 993 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 MTIF2P46199 727 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 STIM1Q13586 685 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 TRIM65Q6PJ69 517 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 SRGAP1Q7Z6B7 1085 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CNGA4Q8IV77 575 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 ZNF654Q8IZM8 581 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 TC2NQ8N9U0 490 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC47Q96A33 483 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CTAGE1Q96RT6 745 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 CNNM2Q9H8M5 875 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 PALLDQ8WX93 1383 aa7.44□□□□□ -1.22
CSDE1-203ENST00000358528 BAZ2BQ9UIF8 2168 aaKnown RBP7.44□□□□□ -1.22
CSDE1-203ENST00000358528 SASH3O75995 380 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 STAT6P42226 847 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 PLCD1P51178 756 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 RNF41Q9H4P4 317 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-203ENST00000358528 CDC23Q9UJX2 597 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 FAM208AQ9UK61 1670 aaKnown RBP7.43□□□□□ -1.22
CSDE1-203ENST00000358528 CYP2D7A0A087X1C5 515 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 POTEB2H3BUK9 544 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 TBC1D8O95759 1140 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 SPATA5Q8NB90 893 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 FANCBQ8NB91 859 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 ESR2Q92731 530 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 ASAP1Q9ULH1 1129 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 MRFAP1Q9Y605 127 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 AKAP12Q02952 1782 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 N4BP1O75113 896 aaKnown RBP7.43□□□□□ -1.22
CSDE1-203ENST00000358528 MMP1P03956 469 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 BCAMP50895 628 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC178Q5BJE1 867 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 TUBE1Q9UJT0 475 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 SALL1Q9NSC2 1324 aa7.43□□□□□ -1.22
CSDE1-203ENST00000358528 PATL2C9JE40 543 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 SSBP05455 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 UBA7P41226 1012 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 PIP4K2BP78356 416 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 SPATA1Q5VX52 437 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 RAD9BQ6WBX8 426 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 ENOX1Q8TC92 643 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 FAM107BQ9H098 131 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TSPYL1Q9H0U9 437 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 GNL3LQ9NVN8 582 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TFR2Q9UP52 801 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 LUC7L2Q9Y383 392 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 RGPD8O14715 1765 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 SRGAP2O75044 1071 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 MAP3K9P80192 1104 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 BRD3Q15059 726 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 HLFQ16534 295 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC96Q2M329 555 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TTC38Q5R3I4 469 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TTC19Q6DKK2 380 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 IQUBQ8NA54 791 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 NELFBQ8WX92 580 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 AGXT2Q9BYV1 514 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 LY9Q9HBG7 655 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 VAT1LQ9HCJ6 419 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TNKSO95271 1327 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC194A0A1B0GVG4 234 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TSPY2A6NKD2 308 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 CIAO1O76071 339 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 PTGDRQ13258 359 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms