RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 POLR2DO15514 142 aaKnown RBP28.69■■■□□ 2.18
HDGF-201ENST00000357325 GTF2E1P29083 439 aaPredicted RBP28.69■■■□□ 2.18
HDGF-201ENST00000357325 GOLGA8FQ08AF8 430 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 GOLGA8DPQ0D2H9 430 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 ZNF827Q17R98 1081 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 SERTAD1Q9UHV2 236 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 CASZ1Q86V15 1759 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 IKBKBO14920 756 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 PTPREP23469 700 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 E4F1Q66K89 784 aaPredicted RBP28.69■■■□□ 2.18
HDGF-201ENST00000357325 CLEC4GQ6UXB4 293 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 ZSCAN10Q96SZ4 725 aaPredicted RBP28.69■■■□□ 2.18
HDGF-201ENST00000357325 GNL3LQ9NVN8 582 aaKnown RBP28.69■■■□□ 2.18
HDGF-201ENST00000357325 FANCLQ9NW38 375 aa28.69■■■□□ 2.18
HDGF-201ENST00000357325 COL5A3P25940 1745 aaPredicted RBP28.68■■■□□ 2.18
HDGF-201ENST00000357325 SLC4A8Q2Y0W8 1093 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 CAVIN4Q5BKX8 364 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 CTR9Q6PD62 1173 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 TMTC2Q8N394 836 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 TMEM232C9JQI7 657 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 FUT2Q10981 343 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 AMIGO3Q86WK7 504 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 IMPACTQ9P2X3 320 aa28.68■■■□□ 2.18
HDGF-201ENST00000357325 USP17L12C9JPN9 530 aa28.67■■■□□ 2.18
HDGF-201ENST00000357325 USP17L21D6R901 530 aa28.67■■■□□ 2.18
HDGF-201ENST00000357325 GSDMDP57764 484 aa28.67■■■□□ 2.18
HDGF-201ENST00000357325 MYL5Q02045 173 aa28.67■■■□□ 2.18
HDGF-201ENST00000357325 NCBP1Q09161 790 aaKnown RBP28.67■■■□□ 2.18
HDGF-201ENST00000357325 PTPN14Q15678 1187 aa28.67■■■□□ 2.18
HDGF-201ENST00000357325 MTERF4Q7Z6M4 381 aaKnown RBP28.67■■■□□ 2.18
HDGF-201ENST00000357325 RILPL1Q5EBL4 403 aa28.67■■■□□ 2.18
HDGF-201ENST00000357325 SMARCC1Q92922 1105 aaPredicted RBP28.67■■■□□ 2.18
HDGF-201ENST00000357325 V9GY48 417 aaPredicted RBP28.67■■■□□ 2.18
HDGF-201ENST00000357325 CCDC196A0A1B0GTZ2 297 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 ANKRD7Q92527 254 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 CSRNP2Q9H175 543 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 AATFQ9NY61 560 aaKnown RBP eCLIP28.66■■■□□ 2.18
HDGF-201ENST00000357325 CYP2D6P10635 497 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 MECOMQ03112 1051 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 BARGINQ6ZT62 677 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 TXNRD3Q86VQ6 643 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 DUOX1Q9NRD9 1551 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 MAN1B1Q9UKM7 699 aa28.66■■■□□ 2.18
HDGF-201ENST00000357325 PRDX5P30044 214 aa28.65■■■□□ 2.18
HDGF-201ENST00000357325 TPM4P67936 248 aa28.65■■■□□ 2.18
HDGF-201ENST00000357325 CCDC112Q8NEF3 446 aa28.65■■■□□ 2.18
HDGF-201ENST00000357325 NSUN4Q96CB9 384 aaKnown RBP28.65■■■□□ 2.18
HDGF-201ENST00000357325 BAZ2BQ9UIF8 2168 aaKnown RBP28.65■■■□□ 2.18
HDGF-201ENST00000357325 UBASH3AP57075 661 aa28.65■■■□□ 2.18
HDGF-201ENST00000357325 FMR1Q06787 632 aaKnown RBP eCLIP28.65■■■□□ 2.182e-7■■□□□ 12.4
HDGF-201ENST00000357325 GLIPR1L2Q4G1C9 344 aa28.65■■■□□ 2.18
HDGF-201ENST00000357325 FAM47AQ5JRC9 791 aa28.65■■■□□ 2.18
HDGF-201ENST00000357325 IFIT1BQ5T764 474 aaKnown RBP28.65■■■□□ 2.18
HDGF-201ENST00000357325 MYH6P13533 1939 aa28.64■■■□□ 2.18
HDGF-201ENST00000357325 SERPINC1P01008 464 aa28.64■■■□□ 2.18
HDGF-201ENST00000357325 FAM182BQ5T319 152 aa28.64■■■□□ 2.18
HDGF-201ENST00000357325 FBXO33Q7Z6M2 555 aa28.64■■■□□ 2.18
HDGF-201ENST00000357325 PAXBP1Q9Y5B6 917 aa28.64■■■□□ 2.18
HDGF-201ENST00000357325 A0A087X0B3 334 aa28.64■■■□□ 2.17
HDGF-201ENST00000357325 TROAPQ12815 778 aa28.64■■■□□ 2.17
HDGF-201ENST00000357325 POSTNQ15063 836 aa28.64■■■□□ 2.17
HDGF-201ENST00000357325 PPP4R3BQ5MIZ7 849 aa28.64■■■□□ 2.17
HDGF-201ENST00000357325 MTA3Q9BTC8 594 aa28.64■■■□□ 2.17
HDGF-201ENST00000357325 RNF26Q9BY78 433 aaPredicted RBP28.64■■■□□ 2.17
HDGF-201ENST00000357325 INTS13Q9NVM9 706 aa28.64■■■□□ 2.17
HDGF-201ENST00000357325 SCN7AQ01118 1682 aa28.63■■■□□ 2.17
HDGF-201ENST00000357325 ADAMTS3O15072 1205 aa28.63■■■□□ 2.17
HDGF-201ENST00000357325 VEGFAP15692 232 aaPredicted RBP28.63■■■□□ 2.17
HDGF-201ENST00000357325 SFPQP23246 707 aaKnown RBP eCLIP28.63■■■□□ 2.178e-6■■■■□ 25.1
HDGF-201ENST00000357325 TRMT44Q8IYL2 757 aaKnown RBP28.63■■■□□ 2.17
HDGF-201ENST00000357325 MED15Q96RN5 788 aa28.63■■■□□ 2.17
HDGF-201ENST00000357325 PIP4K2BP78356 416 aa28.62■■■□□ 2.17
HDGF-201ENST00000357325 CFAP100Q494V2 611 aa28.62■■■□□ 2.17
HDGF-201ENST00000357325 BRIP1Q9BX63 1249 aa28.62■■■□□ 2.17
HDGF-201ENST00000357325 SRPRBQ9Y5M8 271 aaKnown RBP28.62■■■□□ 2.17
HDGF-201ENST00000357325 MYH13Q9UKX3 1938 aa28.62■■■□□ 2.17
HDGF-201ENST00000357325 CASP1P29466 404 aa28.62■■■□□ 2.17
HDGF-201ENST00000357325 OLFM4Q6UX06 510 aa28.62■■■□□ 2.17
HDGF-201ENST00000357325 EPSTI1Q96J88 318 aa28.62■■■□□ 2.17
HDGF-201ENST00000357325 CCDC94Q9BW85 323 aaPredicted RBP28.62■■■□□ 2.17
HDGF-201ENST00000357325 RPS8P62241 208 aaKnown RBP28.61■■■□□ 2.17
HDGF-201ENST00000357325 PHF20Q9BVI0 1012 aa28.61■■■□□ 2.17
HDGF-201ENST00000357325 ACTN4O43707 911 aaKnown RBP28.61■■■□□ 2.17
HDGF-201ENST00000357325 PDCL2Q8N4E4 241 aa28.61■■■□□ 2.17
HDGF-201ENST00000357325 PPP1R13BQ96KQ4 1090 aa28.61■■■□□ 2.17
HDGF-201ENST00000357325 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.61■■■□□ 2.17
HDGF-201ENST00000357325 V9GYY5 206 aaPredicted RBP28.61■■■□□ 2.17
HDGF-201ENST00000357325 RCAN1P53805 252 aa28.6■■■□□ 2.17
HDGF-201ENST00000357325 CCDC150Q8NCX0 1101 aa28.6■■■□□ 2.17
HDGF-201ENST00000357325 AKAP17AQ02040 695 aaKnown RBP28.6■■■□□ 2.17
HDGF-201ENST00000357325 NPY5RQ15761 445 aa28.6■■■□□ 2.17
HDGF-201ENST00000357325 CATIPQ7Z7H3 387 aa28.6■■■□□ 2.17
HDGF-201ENST00000357325 DCP1AQ9NPI6 582 aaPredicted RBP28.6■■■□□ 2.17
HDGF-201ENST00000357325 SLC10A5Q5PT55 438 aa28.59■■■□□ 2.17
HDGF-201ENST00000357325 SARSP49591 514 aaKnown RBP28.59■■■□□ 2.17
HDGF-201ENST00000357325 SRBD1Q8N5C6 995 aaKnown RBP28.59■■■□□ 2.17
HDGF-201ENST00000357325 FGRP09769 529 aa28.58■■■□□ 2.17
HDGF-201ENST00000357325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.58■■■□□ 2.172e-6■■■■■ 37.3
HDGF-201ENST00000357325 PRPF3O43395 683 aaKnown RBP28.58■■■□□ 2.17
HDGF-201ENST00000357325 NBPF5PQ86XG9 351 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms