RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PES1O00541 588 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 TEX33O43247 280 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 RANBP6O60518 1105 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 CUTAO60888 179 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 SUGCTQ9HAC7 445 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 VPS18Q9P253 973 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 UBN2Q6ZU65 1347 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZNF532Q9HCE3 1301 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 SNAP23O00161 211 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 STX10O60499 249 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 CPP00450 1065 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 CCDC175P0C221 793 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 MAP3K9P80192 1104 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZNF569Q5MCW4 686 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 FOXR1Q6PIV2 292 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 TMEM139Q8IV31 216 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 NOSTRINQ8IVI9 506 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 NBPF3Q9H094 633 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 NAPBQ9H115 298 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 PCDHB6Q9Y5E3 794 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 MRFAP1Q9Y605 127 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
CDC42SE1-201ENST00000357235 SH2B2O14492 632 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 CCT6AP40227 531 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 USP8P40818 1118 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 LONRF2Q1L5Z9 754 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 MICALL1Q8N3F8 863 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 IGSF22Q8N9C0 903 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 CABP5Q9NP86 173 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 MARF1Q9Y4F3 1742 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 MRC1P22897 1456 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 A0A0G2JS52 829 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 GOLGA6L9A6NEM1 432 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 KIF5CO60282 957 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 JAKMIP3Q5VZ66 844 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 TADA2BQ86TJ2 420 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 TRIM22Q8IYM9 498 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 CERKQ8TCT0 537 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 CCDC102AQ96A19 550 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 PDE11AQ9HCR9 933 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZNF142P52746 1687 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 LMO7Q8WWI1 1683 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 AKR1B15C9JRZ8 316 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 RPS6KA5O75582 802 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 RBL2Q08999 1139 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 TOM1L2Q6ZVM7 507 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 PIH1D3Q9NQM4 214 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 ZSWIM5Q9P217 1185 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
CDC42SE1-201ENST00000357235 MEGF6O75095 1541 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 ITGA6P23229 1130 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 H3BQF6 201 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 CIAO1O76071 339 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 ADD2P35612 726 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 TXLNAP40222 546 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 PHKA1P46020 1223 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 BIRC2Q13490 618 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 CDC5LQ99459 802 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 CSRNP2Q9H175 543 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 GREM2Q9H772 168 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 ARMT1Q9H993 441 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 SEC31BQ9NQW1 1179 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 OVOS2A0A0G2JMS6 1433 aa9.33□□□□□ -0.92
CDC42SE1-201ENST00000357235 ERICH2A1L162 156 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 MBD4O95243 580 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 TOB1P50616 345 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 RAD9BQ6WBX8 426 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 FCHSD1Q86WN1 690 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 FBXL16Q8N461 479 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 MAGEB6Q8N7X4 407 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 MIGA1Q8NAN2 632 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 MLKLQ8NB16 471 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 ACRBPQ8NEB7 543 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 RABGGTAQ92696 567 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 KIFC2Q96AC6 838 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 EPSTI1Q96J88 318 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 FUT8Q9BYC5 575 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 LY9Q9HBG7 655 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 MAPK8IP1Q9UQF2 711 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 LAMA4Q16363 1823 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 MINDY4BA8MYZ0 360 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 PRKAB2O43741 272 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 N4BP1O75113 896 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 PDE6AP16499 860 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 CASP14P31944 242 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 AKAP17AQ02040 695 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 SEMA3FQ13275 785 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 RTN1Q16799 776 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 GIMAP7Q8NHV1 300 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 IGDCC4Q8TDY8 1250 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms