RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TBC1D10BQ4KMP7 808 aaPredicted RBP21.31■■□□□ 1
SMARCD3-202ENST00000356800 APOA5Q6Q788 366 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 DNAJC18Q9H819 358 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 VEZTQ9HBM0 779 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 ZNF287Q9HBT7 754 aa21.31■■□□□ 1
SMARCD3-202ENST00000356800 NAP1L2Q9ULW6 460 aaPredicted RBP21.31■■□□□ 1
SMARCD3-202ENST00000356800 DDNO94850 711 aaPredicted RBP21.3■■□□□ 1
SMARCD3-202ENST00000356800 IQCA1Q86XH1 822 aa21.3■■□□□ 1
SMARCD3-202ENST00000356800 RAB11FIP4Q86YS3 637 aa21.3■■□□□ 1
SMARCD3-202ENST00000356800 ZSCAN29Q8IWY8 852 aaPredicted RBP21.3■■□□□ 1
SMARCD3-202ENST00000356800 ZNF444Q8N0Y2 327 aaPredicted RBP21.3■■□□□ 1
SMARCD3-202ENST00000356800 NCOA5Q9HCD5 579 aaKnown RBP21.3■■□□□ 1
SMARCD3-202ENST00000356800 IL17RBQ9NRM6 502 aa21.3■■□□□ 1
SMARCD3-202ENST00000356800 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.3■■□□□ 1
SMARCD3-202ENST00000356800 ASTN2O75129 1339 aaPredicted RBP21.29■■□□□ 1
SMARCD3-202ENST00000356800 GOLGA8BA8MQT2 603 aa21.29■■□□□ 1
SMARCD3-202ENST00000356800 MYO1BO43795 1136 aa21.29■■□□□ 1
SMARCD3-202ENST00000356800 SHMT1P34896 483 aa21.29■■□□□ 1
SMARCD3-202ENST00000356800 CCT2P78371 535 aaKnown RBP21.29■■□□□ 1
SMARCD3-202ENST00000356800 FAM151AQ8WW52 585 aa21.29■■□□□ 1
SMARCD3-202ENST00000356800 PI4KBQ9UBF8 816 aa21.29■■□□□ 1
SMARCD3-202ENST00000356800 ERICH2A1L162 156 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 KIF4BQ2VIQ3 1234 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 NFXL1Q6ZNB6 911 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 SWAP70Q9UH65 585 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 GREB1LQ9C091 1923 aaPredicted RBP21.28■■□□□ 1
SMARCD3-202ENST00000356800 FAM196BA6NMK8 535 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 H7C1D1 291 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 GRIN3BO60391 1043 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 TSPY3P0CV98 308 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 TSPY8P0CW00 308 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 EPS15P42566 896 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 RAB3GAP1Q15042 981 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 RCSD1Q6JBY9 416 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 FAM83AQ86UY5 434 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 METTL16Q86W50 562 aaKnown RBP21.28■■□□□ 1
SMARCD3-202ENST00000356800 TMTC2Q8N394 836 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 TRPM4Q8TD43 1214 aa21.28■■□□□ 1
SMARCD3-202ENST00000356800 CCDC69A6NI79 296 aa21.27■■□□□ 1
SMARCD3-202ENST00000356800 NUCB2P80303 420 aa21.27■■□□□ 1
SMARCD3-202ENST00000356800 NEDD1Q8NHV4 660 aa21.27■■□□□ 1
SMARCD3-202ENST00000356800 MYL10Q9BUA6 226 aa21.27■■□□□ 1
SMARCD3-202ENST00000356800 TCP11L1Q9NUJ3 509 aa21.27■■□□□ 1
SMARCD3-202ENST00000356800 PGAP2Q9UHJ9 254 aa21.27■■□□□ 1
SMARCD3-202ENST00000356800 CTDNEP1O95476 244 aa21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 RXRAP19793 462 aa21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 IFIT1BQ5T764 474 aaKnown RBP21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 FOXP4Q8IVH2 680 aaPredicted RBP21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 CDAN1Q8IWY9 1227 aa21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 TMEM39BQ9GZU3 492 aa21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 SCAF8Q9UPN6 1271 aaKnown RBP21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 SMC3Q9UQE7 1217 aa21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 SLC12A7Q9Y666 1083 aa21.26■□□□□ 0.99
SMARCD3-202ENST00000356800 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 ZBTB43O43298 467 aa21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 JAK2O60674 1132 aa21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 AKR1B1P15121 316 aa21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 MICU3Q86XE3 530 aa21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 CRACR2BQ8N4Y2 399 aaPredicted RBP21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 CSRNP1Q96S65 589 aa21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 NID2Q14112 1375 aa21.25■□□□□ 0.99
SMARCD3-202ENST00000356800 GJB2P29033 226 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 PKP1Q13835 747 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 ZNF654Q8IZM8 581 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 NSUN7Q8NE18 718 aaKnown RBP21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 ANKS1AQ92625 1134 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 FAM217BQ9NTX9 383 aaPredicted RBP21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 METAP2P50579 478 aaKnown RBP eCLIP21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 HIRAP54198 1017 aaPredicted RBP21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 TATDN1Q6P1N9 297 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 DGKHQ86XP1 1220 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 HACL1Q9UJ83 578 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 TAOK2Q9UL54 1235 aa21.24■□□□□ 0.99
SMARCD3-202ENST00000356800 CDC27P30260 824 aa21.23■□□□□ 0.99
SMARCD3-202ENST00000356800 RASA3Q14644 834 aa21.23■□□□□ 0.99
SMARCD3-202ENST00000356800 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
SMARCD3-202ENST00000356800 SMARCC2Q8TAQ2 1214 aa21.23■□□□□ 0.99
SMARCD3-202ENST00000356800 POLR2AP24928 1970 aaKnown RBP21.23■□□□□ 0.99
SMARCD3-202ENST00000356800 IGKV6D-41A0A0C4DH26 115 aa21.22■□□□□ 0.99
SMARCD3-202ENST00000356800 GOLGA8AA7E2F4 631 aa21.22■□□□□ 0.99
SMARCD3-202ENST00000356800 ADD1P35611 737 aaKnown RBP21.22■□□□□ 0.99
SMARCD3-202ENST00000356800 NOVP48745 357 aa21.22■□□□□ 0.99
SMARCD3-202ENST00000356800 CHMP4CQ96CF2 233 aa21.22■□□□□ 0.99
SMARCD3-202ENST00000356800 RCAN1P53805 252 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 TROAPQ12815 778 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 SHROOM1Q2M3G4 852 aaPredicted RBP21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 CCDC178Q5BJE1 867 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 SYNE3Q6ZMZ3 975 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 CEP95Q96GE4 821 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 TEPSINQ96N21 525 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 PTPDC1A2A3K4 754 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 TNNI2P48788 182 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 RRP1BQ14684 758 aaKnown RBP21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 NFKBIBQ15653 356 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 TRIM34Q9BYJ4 488 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 HERC5Q9UII4 1024 aaKnown RBP21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 ZDHHC9Q9Y397 364 aa21.21■□□□□ 0.99
SMARCD3-202ENST00000356800 MYH4Q9Y623 1939 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms