RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 FXR1P51114 621 aaKnown RBP eCLIP20.1■□□□□ 0.818e-8■■■■□ 22
KDM1A-201ENST00000356634 STAMQ92783 540 aa20.1■□□□□ 0.81
KDM1A-201ENST00000356634 OVOS2A0A0G2JMS6 1433 aa20.1■□□□□ 0.81
KDM1A-201ENST00000356634 CDC25AP30304 524 aa20.1■□□□□ 0.81
KDM1A-201ENST00000356634 TOB1P50616 345 aaPredicted RBP20.1■□□□□ 0.81
KDM1A-201ENST00000356634 CABP4P57796 275 aa20.1■□□□□ 0.81
KDM1A-201ENST00000356634 PIP4K2BP78356 416 aa20.1■□□□□ 0.81
KDM1A-201ENST00000356634 PACS2Q86VP3 889 aa20.1■□□□□ 0.81
KDM1A-201ENST00000356634 NAA15Q9BXJ9 866 aaKnown RBP20.1■□□□□ 0.81
KDM1A-201ENST00000356634 FBXO2Q9UK22 296 aaPredicted RBP20.1■□□□□ 0.81
KDM1A-201ENST00000356634 GUCA1BQ9UMX6 200 aa20.1■□□□□ 0.81
KDM1A-201ENST00000356634 FER1L4A9Z1Z3 1794 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 ZKSCAN3Q9BRR0 538 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.09■□□□□ 0.81
KDM1A-201ENST00000356634 CSRNP2Q9H175 543 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 A0A0G2JS52 829 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 ENC1O14682 589 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 RNF40O75150 1001 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 MAGEA9P43362 315 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 LRRC31Q6UY01 552 aa20.09■□□□□ 0.81
KDM1A-201ENST00000356634 PES1O00541 588 aaKnown RBP20.08■□□□□ 0.81
KDM1A-201ENST00000356634 PTPREP23469 700 aa20.08■□□□□ 0.81
KDM1A-201ENST00000356634 RASGRP2Q7LDG7 609 aa20.08■□□□□ 0.81
KDM1A-201ENST00000356634 N4BP3O15049 544 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 ICE2Q659A1 982 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 CNGA4Q8IV77 575 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 IFNL2Q8IZJ0 200 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 CCDC148Q8NFR7 591 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 DRC1Q96MC2 740 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 VPS16Q9H269 839 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 CABP5Q9NP86 173 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 TTF2Q9UNY4 1162 aaKnown RBP20.08■□□□□ 0.8
KDM1A-201ENST00000356634 ZMYND10O75800 440 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 CD44P16070 742 aaKnown RBP20.08■□□□□ 0.8
KDM1A-201ENST00000356634 ATF3P18847 181 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 SARSP49591 514 aaKnown RBP20.08■□□□□ 0.8
KDM1A-201ENST00000356634 NTRK3Q16288 839 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 SPATA1Q5VX52 437 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 TRIM22Q8IYM9 498 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 RIN2Q8WYP3 895 aaPredicted RBP20.08■□□□□ 0.8
KDM1A-201ENST00000356634 CAPZA3Q96KX2 299 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 HINFPQ9BQA5 517 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 MYO6Q9UM54 1294 aa20.08■□□□□ 0.8
KDM1A-201ENST00000356634 C5P01031 1676 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 KDM6AO15550 1401 aaPredicted RBP20.07■□□□□ 0.8
KDM1A-201ENST00000356634 GYPCP04921 128 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 RABEP2Q9H5N1 569 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 MKRN1Q9UHC7 482 aaKnown RBP20.07■□□□□ 0.8
KDM1A-201ENST00000356634 WWC3Q9ULE0 1092 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 CYP27B1O15528 508 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 A1BGP04217 495 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 ERCC5P28715 1186 aaPredicted RBP20.07■□□□□ 0.8
KDM1A-201ENST00000356634 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 TRIML1Q8N9V2 468 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 AFAP1L1Q8TED9 768 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 TRIM10Q9UDY6 481 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 ADD3Q9UEY8 706 aaKnown RBP20.07■□□□□ 0.8
KDM1A-201ENST00000356634 JRKLQ9Y4A0 524 aa20.07■□□□□ 0.8
KDM1A-201ENST00000356634 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 WHAMMP3Q1A5X7 153 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 NBPF14Q5TI25 921 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
KDM1A-201ENST00000356634 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 EPSTI1Q96J88 318 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 STRN4Q9NRL3 753 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 ACTN4O43707 911 aaKnown RBP20.06■□□□□ 0.8
KDM1A-201ENST00000356634 MMP1P03956 469 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 CTDSPL2Q05D32 466 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 RILPL1Q5EBL4 403 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 KANK3Q6NY19 840 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 FAM217BQ9NTX9 383 aaPredicted RBP20.06■□□□□ 0.8
KDM1A-201ENST00000356634 HDAC6Q9UBN7 1215 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 CTNND2Q9UQB3 1225 aa20.06■□□□□ 0.8
KDM1A-201ENST00000356634 NT5DC1Q5TFE4 455 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
KDM1A-201ENST00000356634 LY9Q9HBG7 655 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 NWD2Q9ULI1 1742 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 ERVK-24P63145 666 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 OXER1Q8TDS5 423 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 CTAGE1Q96RT6 745 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 MED4Q9NPJ6 270 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 TUBB2AQ13885 445 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 IGDCC4Q8TDY8 1250 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 PPM1EQ8WY54 764 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 WASF1Q92558 559 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 TMEM87BQ96K49 555 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 TUBB2BQ9BVA1 445 aa20.05■□□□□ 0.8
KDM1A-201ENST00000356634 METTL24Q5JXM2 366 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 APTXQ7Z2E3 356 aaKnown RBP20.04■□□□□ 0.8
KDM1A-201ENST00000356634 GSPT2Q8IYD1 628 aaKnown RBP20.04■□□□□ 0.8
KDM1A-201ENST00000356634 TAB2Q9NYJ8 693 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 WDR19Q8NEZ3 1342 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 SRGAP2O75044 1071 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 CIAO1O76071 339 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 MCAMP43121 646 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 TMTC1Q8IUR5 882 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 MICALL1Q8N3F8 863 aa20.04■□□□□ 0.8
KDM1A-201ENST00000356634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.04■□□□□ 0.8
KDM1A-201ENST00000356634 AIDAQ96BJ3 306 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms